RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 NTNG1Q9Y2I2 539 aa10.89□□□□□ -0.67
RFX1-204ENST00000588885 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
RFX1-204ENST00000588885 SLC22A7Q9Y694 548 aa10.89□□□□□ -0.67
RFX1-204ENST00000588885 A0A0G2JN53 185 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 FAM227AF5H4B4 570 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 CLGNO14967 610 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 SBK3P0C264 359 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 DHRS4L1P0CG22 281 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 C1GALT1C1LP0DN25 315 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 COL6A2P12110 1019 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 AHRP35869 848 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 SLC6A12P48065 614 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 SLC18A1P54219 525 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 GUCY1A3Q02108 690 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 ELOAQ14241 798 aaKnown RBP10.88□□□□□ -0.67
RFX1-204ENST00000588885 SLBPQ14493 270 aaKnown RBP eCLIP10.88□□□□□ -0.67
RFX1-204ENST00000588885 ZNF169Q14929 603 aaPredicted RBP10.88□□□□□ -0.67
RFX1-204ENST00000588885 ABRAXAS2Q15018 415 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 NSDHLQ15738 373 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 FAM83EQ2M2I3 478 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 BTBD16Q32M84 506 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 C4orf17Q53FE4 359 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 CRB2Q5IJ48 1285 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 FCRLBQ6BAA4 426 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 TTC19Q6DKK2 380 aaPredicted RBP10.88□□□□□ -0.67
RFX1-204ENST00000588885 IGFL2Q6UWQ7 119 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 ABHD13Q7L211 337 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 CCDC63Q8NA47 563 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 NT5CQ8TCD5 201 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 CREB3L4Q8TEY5 395 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 PPP4R1Q8TF05 950 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 TSLPQ969D9 159 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 IMMP1LQ96LU5 166 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 LMF1Q96S06 567 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 PAIP2Q9BPZ3 127 aaKnown RBP10.88□□□□□ -0.67
RFX1-204ENST00000588885 TMEM79Q9BSE2 394 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 MECRQ9BV79 373 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 SARGQ9BW04 601 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 NMRAL1Q9HBL8 299 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 LANCL2Q9NS86 450 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 INTS9Q9NV88 658 aaKnown RBP10.88□□□□□ -0.67
RFX1-204ENST00000588885 DCDC2Q9UHG0 476 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 RNF112Q9ULX5 631 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 USP9YO00507 2555 aaPredicted RBP10.88□□□□□ -0.67
RFX1-204ENST00000588885 ZGRF1Q86YA3 2104 aa10.88□□□□□ -0.67
RFX1-204ENST00000588885 SPTAN1Q13813 2472 aaKnown RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 CACNA1DQ01668 2161 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 DYTNA2CJ06 578 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 C4orf51C9J302 202 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 CCNT2O60583 730 aaKnown RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 SEMA7AO75326 666 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 STK16O75716 305 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 WDPCPO95876 746 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 S100BP04271 92 aaPredicted RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 FHP07954 510 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 GNAZP19086 355 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 SOX11P35716 441 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 SERPINB4P48594 390 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 ATP6V0D1P61421 351 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 BTN3A2P78410 334 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 BTG2P78543 158 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 RHAGQ02094 409 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 SRSF11Q05519 484 aaKnown RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 HYAL2Q12891 473 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 PCLAFQ15004 111 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 TLR1Q15399 786 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 CCDC153Q494R4 210 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 SFT2D3Q587I9 215 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 XKR6Q5GH73 641 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 HHATQ5VTY9 493 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 KLC3Q6P597 504 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 TMIGD1Q6UXZ0 262 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 LCA5Q86VQ0 697 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.87□□□□□ -0.67
RFX1-204ENST00000588885 TRPV3Q8NET8 790 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 TBC1D20Q96BZ9 403 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 TUBB6Q9BUF5 446 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 AICDAQ9GZX7 198 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.87□□□□□ -0.67
RFX1-204ENST00000588885 MRPL46Q9H2W6 279 aaKnown RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 DNAJC11Q9NVH1 559 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 STMN3Q9NZ72 180 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 CPSF2Q9P2I0 782 aaKnown RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 C19orf25Q9UFG5 118 aaPredicted RBP10.87□□□□□ -0.67
RFX1-204ENST00000588885 ASB1Q9Y576 335 aa10.87□□□□□ -0.67
RFX1-204ENST00000588885 HIVEP3Q5T1R4 2406 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 SCN3AQ9NY46 2000 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 A0A1W2PQ72 361 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 WDR91A4D1P6 747 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 CLEC18AA5D8T8 446 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 A8MUA0 341 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 SUPT3HB4E1H0 165 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 G3V2L1 256 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 UBXN8O00124 270 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 PCDH17O14917 1159 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 PRAMEF4O60810 478 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 KERAO60938 352 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 SUPT3HO75486 399 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 BPGMP07738 259 aa10.86□□□□□ -0.67
RFX1-204ENST00000588885 SERPINA6P08185 405 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms