RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 EEDO75530 441 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 SCELO95171 688 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 HIST1H1TP22492 207 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ITPKBP27987 946 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 PTPN4P29074 926 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 BSGP35613 385 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 XCR1P46094 333 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 RUNX2Q13950 521 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 LRRC69Q6ZNQ3 347 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 SHISA6Q6ZSJ9 500 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ZC3H7AQ8IWR0 971 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 PRSS58Q8IYP2 241 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ACOT4Q8N9L9 421 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 STT3BQ8TCJ2 826 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 PEX11GQ96HA9 241 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 CCNL2Q96S94 520 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 SPSB2Q99619 263 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ROGDIQ9GZN7 287 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ILKAPQ9H0C8 392 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 SOX17Q9H6I2 414 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 MKKSQ9NPJ1 570 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 THAP1Q9NVV9 213 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 VPS29Q9UBQ0 182 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 TCFL5Q9UL49 500 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 A0A087WV48 116 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 KLF11O14901 512 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 SKAP2O75563 359 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 JRKO75564 520 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 KLF7O75840 302 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 SNUPNO95149 360 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 CHEK2O96017 543 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ZGLP1P0C6A0 271 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 TSFMP43897 325 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ARFIP1P53367 373 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 OCA2Q04671 838 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 TLE3Q04726 772 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 TBL3Q12788 808 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 IMPG1Q17R60 797 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 TRIM46Q7Z4K8 759 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 NUDT13Q86X67 352 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 METTL4Q8N3J2 472 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 STARD8Q92502 1023 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 MIEF2Q96C03 454 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 EFHD1Q9BUP0 239 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 NPLQ9BXD5 320 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 WDR54Q9H977 334 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 HAO1Q9UJM8 370 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 ZMIZ1Q9ULJ6 1067 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 PADI2Q9Y2J8 665 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 PTRH2Q9Y3E5 179 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 DSPP15924 2871 aaKnown RBP17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 PIP5K1BO14986 540 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 EFSO43281 561 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 BMP10O95393 424 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 OCRLQ01968 901 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 RNF165Q6ZSG1 346 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 COMMD6Q7Z4G1 85 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 DDIASQ8IXT1 998 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 LRRC8CQ8TDW0 803 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 SLC45A3Q96JT2 553 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 FAM117AQ9C073 453 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 DDX31Q9H8H2 851 aaKnown RBP17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 CLK4Q9HAZ1 481 aaKnown RBP17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 C14orf105Q9NVL8 296 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 PNPOQ9NVS9 261 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 NMRK1Q9NWW6 199 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 CCL27Q9Y4X3 112 aa17.92■□□□□ 0.46
CLPTM1-209ENST00000588855 LOC400499M0QZD8 3231 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 A0A0A6YYD5 115 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 GBAP04062 536 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 CD63P08962 238 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 LINC00032P0C843 101 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 FOLR3P41439 243 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 RPL14P50914 215 aaKnown RBP17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 LIM2P55344 173 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 BTKQ06187 659 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 KLC1Q07866 573 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 IL10RAQ13651 578 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 ERV3-1Q14264 604 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 LAPTM4BQ86VI4 370 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 ZCCHC7Q8N3Z6 543 aaKnown RBP17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 ARFGAP2Q8N6H7 521 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 C1orf52Q8N6N3 182 aaKnown RBP17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 OR2Y1Q8NGV0 311 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 OR2T11Q8NH01 316 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 CKAP2Q8WWK9 683 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 APIPQ96GX9 242 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 MAPKAP1Q9BPZ7 522 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 TGIF2Q9GZN2 237 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 AHSPQ9NZD4 102 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 NXT1Q9UKK6 140 aaKnown RBP17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 DAPP1Q9UN19 280 aa17.91■□□□□ 0.46
CLPTM1-209ENST00000588855 USP24Q9UPU5 2620 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 SLC28A1O00337 649 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 TMPRSS11DO60235 418 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 CREG1O75629 220 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 RSL1D1O76021 490 aaKnown RBP17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 JUNP05412 331 aaKnown RBP17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 KLK1P06870 262 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms