RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 TPSD1Q9BZJ3 242 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 RBM38Q9H0Z9 239 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 SLC6A17Q9H1V8 727 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 MTG2Q9H4K7 406 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SGK2Q9HBY8 427 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 PREBQ9HCU5 417 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FARSBQ9NSD9 589 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 DCAF13Q9NV06 445 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 ATAD3AQ9NVI7 634 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FBXL12Q9NXK8 326 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ACTR10Q9NZ32 417 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 VAPAQ9P0L0 249 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 RSL24D1Q9UHA3 163 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 RPS6KA6Q9UK32 745 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 BLOC1S6Q9UL45 172 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 MMP17Q9ULZ9 603 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SLC22A14Q9Y267 594 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 WBP11Q9Y2W2 641 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 TSC22D4Q9Y3Q8 395 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ORC6Q9Y5N6 252 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3DA0A087WVF3 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3IA0A087WXS9 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3EA0A087X179 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3KA0A087X1G2 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 A0A1W2PQF6 199 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 FAM149AA5PLN7 773 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3FA6NER0 549 aaPredicted RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 CCDC160A6NGH7 325 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 LRRC72A6NJI9 287 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 ARHGEF33A8MVX0 844 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3LB9A6J9 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 C9orf172C9J069 976 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 PDLIM1O00151 329 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 RFXANKO14593 260 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 FPGTO14772 594 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 MID1O15344 667 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 SGTAO43765 313 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 RNGTTO60942 597 aaKnown RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 ZNF217O75362 1048 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 PCDH8O95206 1070 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 EPN2O95208 641 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 FKBP9O95302 570 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 CST1P01037 141 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 RPN2P04844 631 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 ALPLP05186 524 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3HP0C7X1 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 HOXB9P17482 250 aaPredicted RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 GPX2P18283 190 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 SDC1P18827 310 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 CDH2P19022 906 aaPredicted RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 NOS3P29474 1203 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 SERPINB1P30740 379 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TRIM23P36406 574 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 GPR1P46091 355 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 HLCSP50747 726 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 GZMMP51124 257 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 RAD23AP54725 363 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 NUP107P57740 925 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 RPA4Q13156 261 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 DOC2AQ14183 400 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 GK3PQ14409 553 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 NKG7Q16617 165 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 PGS1Q32NB8 556 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 CYBRD1Q53TN4 286 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 PIP5KL1Q5T9C9 394 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 THEMIS2Q5TEJ8 643 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 CPZQ66K79 652 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3GQ6DHY5 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3CQ6IPX1 549 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 CAPN13Q6MZZ7 669 aaPredicted RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 PNCKQ6P2M8 343 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 GALNT18Q6P9A2 607 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TMEM220Q6QAJ8 160 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 SUSD1Q6UWL2 747 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 UNC5DQ6UXZ4 953 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 GCNT7Q6ZNI0 430 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 PARS2Q7L3T8 475 aaKnown RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 LPCAT2Q7L5N7 544 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 DET1Q7L5Y6 550 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 R3HCC1LQ7Z5L2 792 aaKnown RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 GPR141Q7Z602 305 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 THAP5Q7Z6K1 395 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 SYT12Q8IV01 421 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 VRK3Q8IV63 474 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 MSRB3Q8IXL7 192 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TBC1D3Q8IZP1 549 aaPredicted RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 C8orf59Q8N0T1 100 aaPredicted RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 CLEC4FQ8N1N0 589 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 CAMKK1Q8N5S9 505 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 KRTCAP2Q8N6L1 136 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 ZNF366Q8N895 744 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 RASGEF1AQ8N9B8 481 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 WDR20Q8TBZ3 569 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 HDAC2Q92769 488 aaKnown RBP5.51□□□□□ -1.53
SDF2-206ENST00000587788 SCAMP4Q969E2 229 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 NCLNQ969V3 563 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 TMBIM1Q969X1 311 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 ARRDC3Q96B67 414 aa5.51□□□□□ -1.53
SDF2-206ENST00000587788 MTFMTQ96DP5 389 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms