RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TCAIMQ8N3R3 496 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 FAM47BQ8NA70 645 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 B3GNT7Q8NFL0 401 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 ESAMQ96AP7 390 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 QRFPRQ96P65 431 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 CPNE1Q99829 537 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 ERP44Q9BS26 406 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 NPLQ9BXD5 320 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-205ENST00000587774 DEFB126Q9BYW3 111 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 TRIM45Q9H8W5 580 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-205ENST00000587774 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
TRIM47-205ENST00000587774 DNAJC11Q9NVH1 559 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 GRHL1Q9NZI5 618 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 WHRNQ9P202 907 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 TXNDC16Q9P2K2 825 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 ZNF223Q9UK11 482 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-205ENST00000587774 CLDN16Q9Y5I7 305 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 NINQ8N4C6 2090 aa17.54■□□□□ 0.4
TRIM47-205ENST00000587774 INTS1Q8N201 2190 aaKnown RBP17.53■□□□□ 0.4
TRIM47-205ENST00000587774 FCHO1O14526 889 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 ZNHIT1O43257 154 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 RAD51CO43502 376 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 CLEC3AO75596 197 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 C1QAP02745 245 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 STMN1P16949 149 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 ZNF24P17028 368 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 TNFRSF8P28908 595 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 TRHRP34981 398 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-205ENST00000587774 GMPRP36959 345 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 PLA2G16P53816 162 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 RAB38P57729 211 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 HSF1Q00613 529 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 C2orf54Q08AI8 447 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 TERF2Q15554 542 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 ZKSCAN8Q15776 578 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-205ENST00000587774 ADPRMQ3LIE5 342 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 RNFT1Q5M7Z0 435 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 Q6ZPB1 254 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-205ENST00000587774 PDPRQ8NCN5 879 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 OR2L5Q8NG80 312 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 EXT2Q93063 718 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 SEC16BQ96JE7 1060 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 PITHD1Q9GZP4 211 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-205ENST00000587774 REXO4Q9GZR2 422 aaKnown RBP17.53■□□□□ 0.4
TRIM47-205ENST00000587774 EHD1Q9H4M9 534 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 NT5DC2Q9H857 520 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 PRTFDC1Q9NRG1 225 aa17.53■□□□□ 0.4
TRIM47-205ENST00000587774 AKAP9Q99996 3911 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 A0A088AWK7 358 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 FAM187AA6NFU0 413 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 ANKDD1BA6NHY2 528 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 FAM159BA6NKW6 160 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 CLGNO14967 610 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 EIF3HO15372 352 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRIM47-205ENST00000587774 B3GALT2O43825 422 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 CD22P20273 847 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 ZNF10P21506 573 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-205ENST00000587774 CERS1P27544 350 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 GP5P40197 560 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 HLCSP50747 726 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 CLCN2P51788 898 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 ATP6V0D1P61421 351 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 SLC13A2Q13183 592 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 PDK4Q16654 411 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 TRIM40Q6P9F5 258 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 SPPL2CQ8IUH8 684 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 SRRM1Q8IYB3 904 aaKnown RBP17.52■□□□□ 0.4
TRIM47-205ENST00000587774 SNX31Q8N9S9 440 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 SPATA4Q8NEY3 305 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 TMEM125Q96AQ2 219 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 VMP1Q96GC9 406 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 CSF3RQ99062 836 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 CAPS2Q9BXY5 557 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 PNO1Q9NRX1 252 aaKnown RBP17.52■□□□□ 0.4
TRIM47-205ENST00000587774 ASB1Q9Y576 335 aa17.52■□□□□ 0.4
TRIM47-205ENST00000587774 TEP1Q99973 2627 aaKnown RBP17.52■□□□□ 0.4
TRIM47-205ENST00000587774 POLQO75417 2590 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 ENO4A6NNW6 628 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 ASNA1O43681 348 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 STK16O75716 305 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 ESRRAP11474 423 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-205ENST00000587774 EPORP19235 508 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 HTR1EP28566 365 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 HSD17B7P56937 341 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 GPX6P59796 221 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 RAB10P61026 200 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 DOC2AQ14183 400 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 XKR6Q5GH73 641 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 CDKL4Q5MAI5 379 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 SULT1C3Q6IMI6 304 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 MAATS1Q7Z4T9 603 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 CLNKQ7Z7G1 428 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 CHERPQ8IWX8 916 aaKnown RBP17.51■□□□□ 0.39
TRIM47-205ENST00000587774 MCEMP1Q8IX19 187 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 CYP4Z2PQ8N1L4 340 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 GHDCQ8N2G8 530 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 ADAMTS18Q8TE60 1221 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 NCLNQ969V3 563 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 WDR34Q96EX3 536 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 PTCD3Q96EY7 689 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms