RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 BAHD1Q8TBE0 780 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 REXO5Q96IC2 774 aaKnown RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 ZFYVE21Q9BQ24 234 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 ABCG4Q9H172 646 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 GORASP2Q9H8Y8 452 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 PILRAQ9UKJ1 303 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 LRRC42Q9Y546 428 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 NOBOXO60393 691 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 TBX19O60806 448 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 UBXN7O94888 489 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 C1QCP02747 245 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 ANXA6P08133 673 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 UMPSP11172 480 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 IL10P22301 178 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 PPIBP23284 216 aaKnown RBP18.87■□□□□ 0.61
TRIM47-204ENST00000587339 ATP5A1P25705 553 aaKnown RBP18.87■□□□□ 0.61
TRIM47-204ENST00000587339 POLE2P56282 527 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 SLAMF1Q13291 335 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 GAB1Q13480 694 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 TBCELQ5QJ74 424 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 NDUFAF5Q5TEU4 345 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 IRAK1BP1Q5VVH5 260 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 ADGRG5Q8IZF4 528 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 NATD1Q8N6N6 113 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 TRIML2Q8N7C3 387 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 NT5CQ8TCD5 201 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 PNPT1Q8TCS8 783 aaKnown RBP18.87■□□□□ 0.61
TRIM47-204ENST00000587339 DNAJC9Q8WXX5 260 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 PPWD1Q96BP3 646 aaKnown RBP18.87■□□□□ 0.61
TRIM47-204ENST00000587339 THAP11Q96EK4 314 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 TAS2R9Q9NYW1 312 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 SPAG17Q6Q759 2223 aa18.87■□□□□ 0.61
TRIM47-204ENST00000587339 PIAS2O75928 621 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 DRD2P14416 443 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 PPP1CAP62136 330 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 FAM180BQ6P0A1 224 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 ZCCHC7Q8N3Z6 543 aaKnown RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 ZFP90Q8TF47 636 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 GAL3ST3Q96A11 431 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 TM4SF19Q96DZ7 209 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 FAIM2Q9BWQ8 316 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 KLHL4Q9C0H6 718 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 POMT2Q9UKY4 750 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 CORO2BQ9UQ03 480 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 GMEB1Q9Y692 573 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 CXCR6O00574 342 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 GUCY1B2O75343 617 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 TEAD4Q15561 434 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 MTX3Q5HYI7 312 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 IZUMO2Q6UXV1 221 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 ZNF551Q7Z340 670 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 CLEC4FQ8N1N0 589 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 LRTOMTQ8WZ04 291 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 RERGQ96A58 199 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 ZNF764Q96H86 408 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 SLC38A3Q99624 504 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 ZNF184Q99676 751 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 UCK1Q9HA47 277 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 PRMT8Q9NR22 394 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 UCKL1Q9NWZ5 548 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 C5AR2Q9P296 337 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 ANAPC2Q9UJX6 822 aa18.86■□□□□ 0.61
TRIM47-204ENST00000587339 MDC1Q14676 2089 aaKnown RBP18.86■□□□□ 0.61
TRIM47-204ENST00000587339 GOLGA4Q13439 2230 aaKnown RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 A0A1B0GVT2 93 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 PDPK1O15530 556 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 HNRNPRO43390 633 aaKnown RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 LAMTOR5O43504 91 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 PRAMEF10O60809 474 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 TIPRLO75663 272 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 SCELO95171 688 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 NTRK1P04629 796 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 CERS1P27544 350 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 DHPSP49366 369 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 TAF11Q15544 211 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 GRAMD1BQ3KR37 738 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 OGFRL1Q5TC84 451 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 LYSMD4Q5XG99 296 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 FRMPD2BQ6IN97 320 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 ZCCHC8Q6NZY4 707 aaKnown RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 GPR155Q7Z3F1 870 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 C17orf82Q86X59 251 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 KBTBD2Q8IY47 623 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 TMEM102Q8N9M5 508 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 CAMKVQ8NCB2 501 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 EDAQ92838 391 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 NCLNQ969V3 563 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 EXOSC8Q96B26 276 aaKnown RBP18.85■□□□□ 0.61
TRIM47-204ENST00000587339 CACNA1IQ9P0X4 2223 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 MUC3AQ02505 3323 aa18.85■□□□□ 0.61
TRIM47-204ENST00000587339 URADA6NGE7 173 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 ZNF888P0CJ79 500 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 BTN3A2P78410 334 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 MRM1Q6IN84 353 aaKnown RBP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 ANGPTL8Q6UXH0 198 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 WDR5BQ86VZ2 330 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 FAM110BQ8TC76 370 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 FAM162AQ96A26 154 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms