RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 B3GNT3Q9Y2A9 372 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 PCDHGA11Q9Y5H2 935 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 FAM227AF5H4B4 570 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 SAP18O00422 153 aaKnown RBP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 CLDN9O95484 217 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 TGFB1P01137 390 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 ITGAMP11215 1152 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 PYGBP11216 843 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 KRT15P19012 456 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 PIK3CBP42338 1070 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 BTG2P78543 158 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 MFAP5Q13361 173 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 RUNX2Q13950 521 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 RCN2Q14257 317 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 EXT1Q16394 746 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 AP5B1Q2VPB7 878 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 KHDRBS2Q5VWX1 349 aaKnown RBP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 PLAG1Q6DJT9 500 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 OR52B6Q8NGF0 335 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 EPS8L3Q8TE67 593 aaKnown RBP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 PPP4R1Q8TF05 950 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 IMMP1LQ96LU5 166 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 NSUN5Q96P11 429 aaKnown RBP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 CDK15Q96Q40 435 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 OR51B5Q9H339 312 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 SEMA4BQ9NPR2 832 aaPredicted RBP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 DMRT3Q9NQL9 472 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 TMEM216Q9P0N5 145 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 MAP10Q9P2G4 905 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 RNF11Q9Y3C5 154 aa13.93□□□□□ -0.18
ATG4D-207ENST00000587256 V9GYY5 206 aaPredicted RBP13.93□□□□□ -0.18
ATG4D-207ENST00000587256 H0YIV9 168 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 RTCAO00442 366 aaKnown RBP13.92□□□□□ -0.18
ATG4D-207ENST00000587256 OR7A17O14581 309 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 WISP1O95388 367 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 GSTA1P08263 222 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 RPS17P08708 135 aaKnown RBP13.92□□□□□ -0.18
ATG4D-207ENST00000587256 SBK3P0C264 359 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 SOX11P35716 441 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 HSD17B3P37058 310 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 RPS13P62277 151 aaKnown RBP13.92□□□□□ -0.18
ATG4D-207ENST00000587256 ARG2P78540 354 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 SLC13A2Q13183 592 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 ZRSR2Q15696 482 aaKnown RBP13.92□□□□□ -0.18
ATG4D-207ENST00000587256 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
ATG4D-207ENST00000587256 IQCKQ8N0W5 287 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 RNF175Q8N4F7 328 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 L3MBTL4Q8NA19 623 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 Q8NA96 180 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 CPT1CQ8TCG5 803 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 MZB1Q8WU39 189 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 PRTFDC1Q9NRG1 225 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 TEKT2Q9UIF3 430 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 DAPP1Q9UN19 280 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 MMACHCQ9Y4U1 282 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 SPACA6W5XKT8 324 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 MYO18BQ8IUG5 2567 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 DOCK10Q96BY6 2186 aa13.92□□□□□ -0.18
ATG4D-207ENST00000587256 IGKV3D-11A0A0A0MRZ8 115 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 TCRBV16S1A1N1A0A5B0 115 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 DYTNA2CJ06 578 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 A8MUI8 341 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 CLDN4O14493 209 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 GLRA3O75311 464 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 OTCP00480 354 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 HIST1H1TP22492 207 aaPredicted RBP13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ATP5A1P25705 553 aaKnown RBP13.91□□□□□ -0.18
ATG4D-207ENST00000587256 LIM2P55344 173 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 HSD17B7P56937 341 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 FOXK1P85037 733 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ZNF33BQ06732 778 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 TRAF3Q13114 568 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 IGFBP7Q16270 282 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 PRR30Q53SZ7 412 aaPredicted RBP13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ABHD17BQ5VST6 288 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 B3GNTL1Q67FW5 361 aaPredicted RBP13.91□□□□□ -0.18
ATG4D-207ENST00000587256 IGFL2Q6UWQ7 119 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ZNF793Q6ZN11 406 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 Q6ZS92 163 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 RPS27LQ71UM5 84 aaKnown RBP13.91□□□□□ -0.18
ATG4D-207ENST00000587256 UBE3DQ7Z6J8 389 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 CLNKQ7Z7G1 428 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ATCAYQ86WG3 371 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 AMER2Q8N7J2 671 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ACOT4Q8N9L9 421 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 DNAJB14Q8TBM8 379 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 ZNF483Q8TF39 744 aaPredicted RBP13.91□□□□□ -0.18
ATG4D-207ENST00000587256 PSMF1Q92530 271 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 RGMAQ96B86 450 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 CSF3RQ99062 836 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 KCNK13Q9HB14 408 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 NECTIN3Q9NQS3 549 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 PRDM7Q9NQW5 492 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 PLAAQ9Y263 795 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 TSC22D4Q9Y3Q8 395 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 CSAG2Q9Y5P2 127 aa13.91□□□□□ -0.18
ATG4D-207ENST00000587256 NBASA2RRP1 2371 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 A0A1W2PPM1 405 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms