RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 RPS18P62269 152 aaKnown RBP18.11■□□□□ 0.49
DDX39A-204ENST00000586558 SRSF6Q13247 344 aaKnown RBP18.11■□□□□ 0.49
DDX39A-204ENST00000586558 ABRAXAS2Q15018 415 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 ST3GAL2Q16842 350 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 SYT16Q17RD7 645 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 SH2D4BQ5SQS7 431 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 CES4AQ5XG92 561 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 CLEC6AQ6EIG7 209 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 MED25Q71SY5 747 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 PAGE2Q7Z2X7 111 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 TRIM46Q7Z4K8 759 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 NUDT13Q86X67 352 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 ZCCHC7Q8N3Z6 543 aaKnown RBP18.11■□□□□ 0.49
DDX39A-204ENST00000586558 ACOT4Q8N9L9 421 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 OR5T3Q8NGG3 340 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 NACC2Q96BF6 587 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 ACPTQ9BZG2 426 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 LYRM4Q9HD34 91 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 ADAM29Q9UKF5 820 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 RAP2CQ9Y3L5 183 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 USP24Q9UPU5 2620 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 K7ENP7 123 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 PSMD12O00232 456 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 RTCAO00442 366 aaKnown RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 KLF11O14901 512 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 PCDH17O14917 1159 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 BMP10O95393 424 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 WT1P19544 449 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 JAK1P23458 1154 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 BSGP35613 385 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 KLC1Q07866 573 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 VAC14Q08AM6 782 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 BST1Q10588 318 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 UGT8Q16880 541 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 INO80CQ6PI98 192 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 ZNF793Q6ZN11 406 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 CA13Q8N1Q1 262 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 METTL4Q8N3J2 472 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 SNRNP27Q8WVK2 155 aaKnown RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 TBC1D20Q96BZ9 403 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 HBEGFQ99075 208 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 CCT7Q99832 543 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 CRB3Q9BUF7 120 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 ZNF717Q9BY31 904 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 MRPL1Q9BYD6 325 aaKnown RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 ILKAPQ9H0C8 392 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 DDX31Q9H8H2 851 aaKnown RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 MANSC1Q9H8J5 431 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 SEMA3GQ9NS98 782 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 HAO1Q9UJM8 370 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 DNAJC15Q9Y5T4 150 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 MRPS18BQ9Y676 258 aaKnown RBP18.1■□□□□ 0.49
DDX39A-204ENST00000586558 SPACA6W5XKT8 324 aa18.1■□□□□ 0.49
DDX39A-204ENST00000586558 EPG5Q9HCE0 2579 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 ITM2AO43736 263 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 LYPLA1O75608 230 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-204ENST00000586558 IGHEP01854 428 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 FHP07954 510 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 CHN1P15882 459 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 SERPINB3P29508 390 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 OLR1P78380 273 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 TBL3Q12788 808 aaKnown RBP18.09■□□□□ 0.49
DDX39A-204ENST00000586558 RUNX2Q13950 521 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 SSPNQ14714 243 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 IMPG1Q17R60 797 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 TUBB8Q3ZCM7 444 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 SPIN4Q56A73 249 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 VWA2Q5GFL6 755 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 RAB43Q86YS6 212 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 PEX11GQ96HA9 241 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 METTL2AQ96IZ6 378 aaKnown RBP18.09■□□□□ 0.49
DDX39A-204ENST00000586558 IP6K3Q96PC2 410 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 PFDN4Q9NQP4 134 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 INTS9Q9NV88 658 aaKnown RBP18.09■□□□□ 0.49
DDX39A-204ENST00000586558 THAP1Q9NVV9 213 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 LYARQ9NX58 379 aaKnown RBP18.09■□□□□ 0.49
DDX39A-204ENST00000586558 DAPP1Q9UN19 280 aa18.09■□□□□ 0.49
DDX39A-204ENST00000586558 MRPS33Q9Y291 106 aaKnown RBP18.09■□□□□ 0.49
DDX39A-204ENST00000586558 PKD1L2Q7Z442 2459 aa18.08■□□□□ 0.49
DDX39A-204ENST00000586558 A0A0A6YYD5 115 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 IDSB3KWA1 339 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 SLC28A1O00337 649 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 SNNO75324 88 aaPredicted RBP18.08■□□□□ 0.48
DDX39A-204ENST00000586558 RSL1D1O76021 490 aaKnown RBP18.08■□□□□ 0.48
DDX39A-204ENST00000586558 UMODP07911 640 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 LIM2P55344 173 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 RAB38P57729 211 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 CDC20Q12834 499 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 UGT3A2Q3SY77 523 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 ATG14Q6ZNE5 492 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 COMMD6Q7Z4G1 85 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 ARFGAP2Q8N6H7 521 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 AGR3Q8TD06 166 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 TWIST2Q8WVJ9 160 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 DYDC1Q8WWB3 177 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 SORBS1Q9BX66 1292 aaKnown RBP18.08■□□□□ 0.48
DDX39A-204ENST00000586558 SOX17Q9H6I2 414 aaPredicted RBP18.08■□□□□ 0.48
DDX39A-204ENST00000586558 LANCL2Q9NS86 450 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 MS4A12Q9NXJ0 267 aa18.08■□□□□ 0.48
DDX39A-204ENST00000586558 ZDHHC2Q9UIJ5 367 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms