RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 ZNF468Q5VIY5 522 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-203ENST00000586339 SYT10Q6XYQ8 523 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 GDF7Q7Z4P5 450 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-203ENST00000586339 MCEMP1Q8IX19 187 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 PHF10Q8WUB8 498 aaKnown RBP13.14□□□□□ -0.31
HDAC5-203ENST00000586339 MS4A6EQ96DS6 147 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 VMP1Q96GC9 406 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 TSPAN10Q9H1Z9 355 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-203ENST00000586339 RHBGQ9H310 441 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 WWOXQ9NZC7 414 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 TXNDC16Q9P2K2 825 aa13.14□□□□□ -0.31
HDAC5-203ENST00000586339 F8P00451 2351 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ANKDD1BA6NHY2 528 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CLGNO14967 610 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 RAD51CO43502 376 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 B3GALT2O43825 422 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 MYO1DO94832 1006 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ABOP16442 354 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 GRNP28799 593 aaKnown RBP13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CASQ1P31415 396 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 HNRNPH1P31943 449 aaKnown RBP13.13□□□□□ -0.31
HDAC5-203ENST00000586339 GDF5P43026 501 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ATP6V0D1P61421 351 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ETF1P62495 437 aaKnown RBP13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CALCOCO2Q13137 446 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 SULT1C3Q6IMI6 304 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 TRIM40Q6P9F5 258 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CYS1Q717R9 158 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ZNF227Q86WZ6 799 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ZNF595Q8IYB9 648 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 OR2L5Q8NG80 312 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CCT6BQ92526 530 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 WDR34Q96EX3 536 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 GPR22Q99680 433 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CPNE1Q99829 537 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CCDC77Q9BR77 488 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 EFCAB11Q9BUY7 163 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 REXO4Q9GZR2 422 aaKnown RBP13.13□□□□□ -0.31
HDAC5-203ENST00000586339 DPH5Q9H2P9 285 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 ADAP2Q9NPF8 381 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 WHRNQ9P202 907 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
HDAC5-203ENST00000586339 CSMD2Q7Z408 3487 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 NCF1BA6NI72 391 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 NCF1CA8MVU1 366 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 KLRC4-KLRK1H3BQV0 150 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 PRRG2O14669 202 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 NCF1P14598 390 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 COX6B1P14854 86 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 STMN1P16949 149 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 GP5P40197 560 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 MTTPP55157 894 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 TGM3Q08188 693 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 RUNX2Q13950 521 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 GPSM1Q86YR5 675 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 GPALPP1Q8IXQ4 340 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 SRRM1Q8IYB3 904 aaKnown RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 CYP4Z2PQ8N1L4 340 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 TMEM156Q8N614 296 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 PDPRQ8NCN5 879 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 QRFPRQ96P65 431 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 SERINC2Q96SA4 455 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 RBBP8Q99708 897 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 PHACTR1Q9C0D0 580 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 COPS7BQ9H9Q2 264 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 MTO1Q9Y2Z2 717 aaKnown RBP13.12□□□□□ -0.31
HDAC5-203ENST00000586339 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
HDAC5-203ENST00000586339 A8MUA0 341 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 E9PLN8 166 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 TFECO14948 347 aaPredicted RBP13.11□□□□□ -0.31
HDAC5-203ENST00000586339 TAPBPO15533 448 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 ITGA10O75578 1167 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 STK16O75716 305 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 CLDN14O95500 239 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 GSTA2P09210 222 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 CCDC166P0CW27 439 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 CD1DP15813 335 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 MEOX1P50221 254 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 GPR143P51810 404 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 SLC13A2Q13183 592 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 LAPTM5Q13571 262 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 EFTUD2Q15029 972 aaKnown RBP eCLIP13.11□□□□□ -0.311e-10■■■■□ 20.3
HDAC5-203ENST00000586339 ELAVL1Q15717 326 aaKnown RBP13.11□□□□□ -0.31
HDAC5-203ENST00000586339 ZKSCAN8Q15776 578 aaPredicted RBP13.11□□□□□ -0.31
HDAC5-203ENST00000586339 PDK4Q16654 411 aa13.11□□□□□ -0.31
HDAC5-203ENST00000586339 C18orf21Q32NC0 220 aaPredicted RBP13.11□□□□□ -0.31
HDAC5-203ENST00000586339 PAGE2BQ5JRK9 111 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms