RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-215ENST00000584944 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 KCNA7Q96RP8 456 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 HBEGFQ99075 208 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 MANSC1Q9H8J5 431 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 WDR54Q9H977 334 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 SYNPO2LQ9H987 977 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 VPS29Q9UBQ0 182 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 CTSFQ9UBX1 484 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 J3QKU1 62 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 PEX12O00623 359 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 CLDN4O14493 209 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 UBFD1O14562 309 aaKnown RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 EFSO43281 561 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 RGS14O43566 566 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 FOXS1O43638 330 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 GUCY1B2O75343 617 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 CREG1O75629 220 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 SEMA3DO95025 777 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 CHRNGP07510 517 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 DHRS4L1P0CG22 281 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 PRKAR1AP10644 381 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 OTX2P32243 289 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 TSFMP43897 325 aaKnown RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 OLR1P78380 273 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 MAT1AQ00266 395 aaKnown RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 ACSM2AQ08AH3 577 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 GALNT1Q10472 559 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 ACSM2BQ68CK6 577 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 FAM198BQ6UWH4 519 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 SHISA6Q6ZSJ9 500 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 RNF175Q8N4F7 328 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 PEX11GQ96HA9 241 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 CRB3Q9BUF7 120 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 NPLQ9BXD5 320 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 SOX17Q9H6I2 414 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 AKIRIN1Q9H9L7 192 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 FARSBQ9NSD9 589 aaKnown RBP13.12□□□□□ -0.31
TRAF4-215ENST00000584944 PSD3Q9NYI0 1048 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 TCFL5Q9UL49 500 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 MKL2Q9ULH7 1088 aa13.12□□□□□ -0.31
TRAF4-215ENST00000584944 A0A1B0GTL3 188 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 CDC14CA4D256 554 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 SLC28A1O00337 649 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 CHST10O43529 356 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 MED26O95402 600 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 IGHEP01854 428 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ZGLP1P0C6A0 271 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 CHN1P15882 459 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 HIST1H1TP22492 207 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-215ENST00000584944 CERS1P27544 350 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 GCGRP47871 477 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ARFIP1P53367 373 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 HYAL2Q12891 473 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ERV3-1Q14264 604 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 SYT16Q17RD7 645 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ADPRMQ3LIE5 342 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 SPIN4Q56A73 249 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 TCHHL1Q5QJ38 904 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-215ENST00000584944 CCNYL2Q5T2Q4 361 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-215ENST00000584944 LCN10Q6JVE6 187 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ZNF517Q6ZMY9 492 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-215ENST00000584944 PDSS2Q86YH6 399 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 DTWD1Q8N5C7 304 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 EFCAB3Q8N7B9 438 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 ACOT4Q8N9L9 421 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 OR2Y1Q8NGV0 311 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 STT3BQ8TCJ2 826 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 TBC1D20Q96BZ9 403 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 SLC45A3Q96JT2 553 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 OR1F2PQ96R84 312 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 MRPL1Q9BYD6 325 aaKnown RBP13.11□□□□□ -0.31
TRAF4-215ENST00000584944 RBCK1Q9BYM8 510 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 RIC8BQ9NVN3 520 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 THAP1Q9NVV9 213 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 LYARQ9NX58 379 aaKnown RBP13.11□□□□□ -0.31
TRAF4-215ENST00000584944 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 IL17BQ9UHF5 180 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 C3orf18Q9UK00 162 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 PPT2Q9UMR5 302 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
TRAF4-215ENST00000584944 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 B8ZZF3 427 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 B4GALT2O60909 372 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 B3GALT4O96024 378 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 FHP07954 510 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms