RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 RBCK1Q9BYM8 510 aa15.29■□□□□ 0.04
ERBB2-222ENST00000584908 DAPP1Q9UN19 280 aa15.29■□□□□ 0.04
ERBB2-222ENST00000584908 HEMK1Q9Y5R4 338 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-222ENST00000584908 UBR5O95071 2799 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-222ENST00000584908 A0A0G2JN53 185 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 SMIM23A6NLE4 172 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PSMD12O00232 456 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CYR61O00622 381 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PRMT3O60678 531 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 DPM1O60762 260 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CDC123O75794 336 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 OTCP00480 354 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 TGFB1P01137 390 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PROCP04070 461 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 IMPDH1P20839 514 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 ATP5A1P25705 553 aaKnown RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PTX3P26022 381 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CERS1P27544 350 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CASRP41180 1078 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CCT5P48643 541 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PRKAA2P54646 552 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 AP2B1P63010 937 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PHEXP78562 749 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CUL3Q13618 768 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 RAPSNQ13702 412 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 ZRSR2Q15696 482 aaKnown RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 NSDHLQ15738 373 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 CCDC153Q494R4 210 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 UNC50Q53HI1 259 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 JMJD6Q6NYC1 403 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 ZNF793Q6ZN11 406 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 RPS27LQ71UM5 84 aaKnown RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 MYLK4Q86YV6 388 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 SCUBE1Q8IWY4 988 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PARP9Q8IXQ6 854 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 KBTBD2Q8IY47 623 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 MYRIPQ8NFW9 859 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PSMF1Q92530 271 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 TSLPQ969D9 159 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 ATP6V1E2Q96A05 226 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 THOC3Q96J01 351 aaKnown RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 TMEM237Q96Q45 408 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 MTERF1Q99551 399 aaKnown RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 OR51B5Q9H339 312 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 COPS7BQ9H9Q2 264 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 LYRM4Q9HD34 91 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 SEMA4BQ9NPR2 832 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-222ENST00000584908 PRDM9Q9NQV7 894 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 MKS1Q9NXB0 559 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 KCMF1Q9P0J7 381 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 ZNF225Q9UK10 706 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 GRID1Q9ULK0 1009 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 MMACHCQ9Y4U1 282 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 MYO18BQ8IUG5 2567 aa15.28■□□□□ 0.04
ERBB2-222ENST00000584908 SPENQ96T58 3664 aaKnown RBP15.27■□□□□ 0.04
ERBB2-222ENST00000584908 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 TCRBV16S1A1N1A0A5B0 115 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 FAM227AF5H4B4 570 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 G3V2L1 256 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 PPP6CO00743 305 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 PLIN3O60664 434 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 B4GALT2O60909 372 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 KRT4P19013 534 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 HIST1H1TP22492 207 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-222ENST00000584908 LIM2P55344 173 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 HSD17B7P56937 341 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 BTG2P78543 158 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 CLCQ05315 142 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 AGAP7PQ5VUJ5 663 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 PLAG1Q6DJT9 500 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 ATG14Q6ZNE5 492 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 MILR1Q7Z6M3 343 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 RNF175Q8N4F7 328 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 ACOT4Q8N9L9 421 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 TEX19Q8NA77 164 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 OR4F6Q8NGB9 312 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 RGMAQ96B86 450 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 CCDC126Q96EE4 140 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 PTCHD1Q96NR3 888 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 AGAP4Q96P64 663 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 CDK15Q96Q40 435 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 ZNF717Q9BY31 904 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-222ENST00000584908 CLDN16Q9Y5I7 305 aa15.27■□□□□ 0.04
ERBB2-222ENST00000584908 PLPP1O14494 284 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 SEMA3DO95025 777 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 PLA2G2AP14555 144 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 SOX11P35716 441 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 CDH13P55290 713 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 NAA20P61599 178 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 RPS13P62277 151 aaKnown RBP15.26■□□□□ 0.03
ERBB2-222ENST00000584908 DDX39BQ13838 428 aaKnown RBP15.26■□□□□ 0.03
ERBB2-222ENST00000584908 RCN2Q14257 317 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 AP5B1Q2VPB7 878 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 SFT2D3Q587I9 215 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 IRAK1BP1Q5VVH5 260 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 FRG2Q64ET8 278 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 OR4C11Q6IEV9 310 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 LETMD1Q6P1Q0 360 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 ZYG11AQ6WRX3 759 aa15.26■□□□□ 0.03
ERBB2-222ENST00000584908 TRABD2AQ86V40 505 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms