RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SCYL1Q96KG9 808 aa13.08□□□□□ -0.32
CSNK1D-224ENST00000584672 RASL10BQ96S79 203 aa13.08□□□□□ -0.32
CSNK1D-224ENST00000584672 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
CSNK1D-224ENST00000584672 CHD3Q12873 2000 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-224ENST00000584672 EEF1E1-BLOC1S5C9J1V9 151 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 EEF1E1O43324 174 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 ZBTB14O43829 449 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 SUSD5O60279 629 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 SMPD2O60906 423 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 TPM3P06753 285 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 CCL3P10147 92 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 GABRA1P14867 456 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 CLCN7P51798 805 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 NAE1Q13564 534 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 TTLL9Q3SXZ7 439 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 MRNIPQ6NTE8 343 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 YTHDF3Q7Z739 585 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 MFSD3Q96ES6 412 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 AARSD1Q9BTE6 412 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 BDH2Q9BUT1 245 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 PCDHA13Q9Y5I0 950 aa13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 SONP18583 2426 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-224ENST00000584672 SYCE3A1L190 88 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 CTAGE15A4D2H0 777 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 TGFBR3LH3BV60 316 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 GFYI3L273 518 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 PIGAP37287 484 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 SKP1P63208 163 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 RGS1Q08116 209 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 FOXO1Q12778 655 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 FBXL19-AS1Q494R0 122 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 POMZP3Q6PJE2 187 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 AGTRAPQ6RW13 159 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 RTL4Q6ZR62 310 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 ABHD13Q7L211 337 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 CTAGE6Q86UF2 777 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 KIF18BQ86Y91 864 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 GPALPP1Q8IXQ4 340 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 CPNE9Q8IYJ1 553 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 PERPQ96FX8 193 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 SPNS1Q9H2V7 528 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 SACM1LQ9NTJ5 587 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 MYOTQ9UBF9 498 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 PACSIN2Q9UNF0 486 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 FREM3P0C091 2139 aa13.06□□□□□ -0.32
CSNK1D-224ENST00000584672 A0A0G2JN53 185 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 C4orf51C9J302 202 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 ZNF354AO60765 605 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 P04436 131 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 MPC1LP0DKB6 136 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 MGAT1P26572 445 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 GPR143P51810 404 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 ZNF136P52737 540 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 KLF1Q13351 362 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 ACSF3Q4G176 576 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 CYHR1Q6ZMK1 362 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 CENPUQ71F23 418 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 CLNKQ7Z7G1 428 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 CA13Q8N1Q1 262 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 PCBD2Q9H0N5 130 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 KLHL31Q9H511 634 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 SYBUQ9NX95 663 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 ADAMTS6Q9UKP5 1117 aa13.05□□□□□ -0.32
CSNK1D-224ENST00000584672 PFDN6O15212 129 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 NRDCO43847 1150 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 HCN1O60741 890 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 AVILO75366 819 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 NID1P14543 1247 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 CEACAM8P31997 349 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 CCR8P51685 355 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 HNRNPFP52597 415 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 HK2P52789 917 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 PWP1Q13610 501 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 BMPR2Q13873 1038 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 PRAMEF20Q5VT98 475 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 MAATS1Q7Z4T9 603 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 VSTM4Q8IW00 320 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 FBXW8Q8N3Y1 598 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 LIX1Q8N485 282 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 ZNF321PQ8N8H1 164 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 TMEM52Q8NDY8 209 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 PYCR2Q96C36 320 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 GPR21Q99679 349 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 FAM129AQ9BZQ8 928 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 FBXO6Q9NRD1 293 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 MED16Q9Y2X0 877 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-224ENST00000584672 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
CSNK1D-224ENST00000584672 CLDN4O14493 209 aa13.03□□□□□ -0.32
CSNK1D-224ENST00000584672 CRLF1O75462 422 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms