RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NKX2-4Q9H2Z4 354 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 NTN4Q9HB63 628 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 CNOT11Q9UKZ1 510 aaKnown RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 PCDHGB3Q9Y5G1 929 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 CHD7Q9P2D1 2997 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 KRBA1A5PL33 1030 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 H3BQ06 376 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 ANKRD28O15084 1053 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 UGT2B11O75310 529 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 KCNK5O95279 499 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 C21orf33P30042 268 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 PXNP49023 591 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 CCT3P49368 545 aaKnown RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 NCS1P62166 190 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 BTN3A2P78410 334 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 WSCD2Q2TBF2 565 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF385BQ569K4 471 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 GRHL2Q6ISB3 625 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 SLCO4C1Q6ZQN7 724 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 GATAD2AQ86YP4 633 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 WDR36Q8NI36 951 aaKnown RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 DACT3Q96B18 629 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 ECHDC3Q96DC8 303 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 OTUB2Q96DC9 234 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF514Q96K75 400 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 QRSL1Q9H0R6 528 aaKnown RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 DNAJC27Q9NZQ0 273 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 MSRAQ9UJ68 235 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 NCKAP1Q9Y2A7 1128 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 CARNS1A5YM72 827 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 H0Y8X5 98 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 H3BMQ9 156 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 CTSEP14091 401 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 CDC42P60953 191 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 P2RY8Q86VZ1 359 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 MFSD2AQ8NA29 543 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 SMPDL3AQ92484 453 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 RPL3LQ92901 407 aaKnown RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 DNAJA3Q96EY1 480 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 COG8Q96MW5 612 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 FUNDC2Q9BWH2 189 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 LRRC72A6NJI9 287 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 GFYI3L273 518 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 ABCB7O75027 752 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 CDC123O75794 336 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 CDK4P11802 303 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 POLR2CP19387 275 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 TTKP33981 857 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 SNAP47Q5SQN1 464 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 GPR149Q86SP6 731 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 KRT73Q86Y46 540 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 PTRH1Q86Y79 214 aaKnown RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 HTRA1Q92743 480 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 OSBPL10Q9BXB5 764 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 DMRT3Q9NQL9 472 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
TOP3A-217ENST00000584582 SERGEFQ9UGK8 458 aa10.81□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF99A8MXY4 864 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 MOSPD3O75425 235 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SLCO2B1O94956 709 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 HNRNPA1P09651 372 aaKnown RBP eCLIP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CKMT1AP12532 417 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CD247P20963 164 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PPIBP23284 216 aaKnown RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 AZGP1P25311 298 aaKnown RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 HLCSP50747 726 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 KIAA0040Q15053 153 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CDKN3Q16667 212 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 DEFB134Q4QY38 66 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 ARMC6Q6NXE6 501 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SMARCD3Q6STE5 483 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PRSS58Q8IYP2 241 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 OR8H2Q8N162 312 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 UHRF1Q96T88 793 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PBX4Q9BYU1 374 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PLGRKTQ9HBL7 147 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 GPR83Q9NYM4 423 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 ADAMDEC1O15204 470 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 YY2O15391 372 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 KLF8O95600 359 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 STSP08842 583 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 MASP1P48740 699 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CDK3Q00526 305 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 NPRL3Q12980 569 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PIN1Q13526 163 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 ATAD3BQ5T9A4 648 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 NUDT13Q86X67 352 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 ARMC8Q8IUR7 673 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 FAM217AQ8IXS0 508 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 RNF168Q8IYW5 571 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 UBE2J2Q8N2K1 259 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 L3MBTL4Q8NA19 623 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CHDHQ8NE62 594 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 QRFPRQ96P65 431 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 LYSMD1Q96S90 227 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 FAM129BQ96TA1 746 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 FAIM2Q9BWQ8 316 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms