RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 LSM12Q3MHD2 195 aaKnown RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 C1orf189Q5VU69 101 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 ZNF793Q6ZN11 406 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 PRSS41Q7RTY9 318 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 PDSS2Q86YH6 399 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 METTL27Q8N6F8 245 aaPredicted RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 COL26A1Q96A83 441 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 SLC46A1Q96NT5 459 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 DPH2Q9BQC3 489 aaPredicted RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 C1orf50Q9BV19 199 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 EBPLQ9BY08 206 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 ZNF717Q9BY31 904 aaPredicted RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 A0A0A6YYD5 115 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 ZNF860A6NHJ4 632 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 MEN1O00255 615 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 UBDO15205 165 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 SNX3O60493 162 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 RDH16O75452 317 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 GBAP04062 536 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 FAM58BPP0C7Q3 252 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 PCSK2P16519 638 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 ZNF28P17035 718 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 TPP2P29144 1249 aaPredicted RBP17.34■□□□□ 0.37
RFFL-211ENST00000584541 TRA2BP62995 288 aaKnown RBP17.34■□□□□ 0.37
RFFL-211ENST00000584541 RAE1P78406 368 aaKnown RBP17.34■□□□□ 0.37
RFFL-211ENST00000584541 DCDP81605 110 aaKnown RBP17.34■□□□□ 0.37
RFFL-211ENST00000584541 ZNF763Q0D2J5 394 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 COL9A2Q14055 689 aaPredicted RBP17.34■□□□□ 0.37
RFFL-211ENST00000584541 ARHGAP40Q5TG30 622 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 IL23RQ5VWK5 629 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 IGF2-ASQ6U949 168 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 FAM9CQ8IZT9 166 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 C10orf82Q8WW14 230 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 NXPE2Q96DL1 559 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 RNF31Q96EP0 1072 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 C11orf24Q96F05 449 aaPredicted RBP17.34■□□□□ 0.37
RFFL-211ENST00000584541 FCRL1Q96LA6 429 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 GBP5Q96PP8 586 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 LYRM4Q9HD34 91 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 ASIC5Q9NY37 505 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 PHF11Q9UIL8 331 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 AK5Q9Y6K8 562 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 MAU2Q9Y6X3 613 aa17.34■□□□□ 0.37
RFFL-211ENST00000584541 E9PBE3 544 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 PSMD12O00232 456 aaPredicted RBP17.33■□□□□ 0.36
RFFL-211ENST00000584541 KLHL41O60662 606 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 CCNYL3P0C7X3 344 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 CD82P27701 267 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 RORAP35398 523 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 OR1D4P47884 311 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 SNRPNP63162 240 aaKnown RBP17.33■□□□□ 0.36
RFFL-211ENST00000584541 OLR1P78380 273 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 DSG2Q14126 1118 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 RPS6KA2Q15349 733 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 GKAP1Q5VSY0 366 aaPredicted RBP17.33■□□□□ 0.36
RFFL-211ENST00000584541 METTL21CQ5VZV1 264 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 DSELQ8IZU8 1212 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 LIX1Q8N485 282 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 EFCAB3Q8N7B9 438 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 AMER3Q8N944 861 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 SLC38A9Q8NBW4 561 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 ADAMTS18Q8TE60 1221 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 YIPF2Q9BWQ6 316 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 MS4A12Q9NXJ0 267 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 KLK13Q9UKR3 277 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 FBXW2Q9UKT8 454 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 DAPP1Q9UN19 280 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 WBP11Q9Y2W2 641 aaKnown RBP17.33■□□□□ 0.36
RFFL-211ENST00000584541 TMEM184BQ9Y519 407 aaPredicted RBP17.33■□□□□ 0.36
RFFL-211ENST00000584541 PCDHGA7Q9Y5G6 932 aa17.33■□□□□ 0.36
RFFL-211ENST00000584541 FER1L5A0AVI2 2057 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 DCHS1Q96JQ0 3298 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 CHST10O43529 356 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 TMPRSS11DO60235 418 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 BCKDHAP12694 445 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 RNH1P13489 461 aaKnown RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 IDO1P14902 403 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 SDC1P18827 310 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 CPN2P22792 545 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 TLX1P31314 330 aaPredicted RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 SLC5A2P31639 672 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 BUD31P41223 144 aaPredicted RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 ASMTP46597 345 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 STX1BP61266 288 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 IRX1P78414 480 aaPredicted RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 CAMK2BQ13554 666 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 RUNX2Q13950 521 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 RTP5Q14D33 572 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 GSTA3Q16772 222 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 NKAIN1Q4KMZ8 207 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 C6orf15Q6UXA7 325 aaPredicted RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 PIGWQ7Z7B1 504 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 GPR180Q86V85 440 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 CA13Q8N1Q1 262 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 DTWD1Q8N5C7 304 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 GALNT6Q8NCL4 622 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 CDC26Q8NHZ8 85 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 C16orf78Q8WTQ4 265 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 MR1Q95460 341 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms