RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SH3BGRLO75368 114 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 TGFB1P01137 390 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 ABHD2P08910 425 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 SNRPAP09012 282 aaKnown RBP19.16■□□□□ 0.66
SS18-224ENST00000584083 CERS1P27544 350 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 SERPINB1P30740 379 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 RAB38P57729 211 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 PCDH1Q08174 1060 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 DDX39BQ13838 428 aaKnown RBP19.16■□□□□ 0.66
SS18-224ENST00000584083 E2F2Q14209 437 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 TSNAXIP1Q2TAA8 658 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 ACER2Q5QJU3 275 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 GRHL2Q6ISB3 625 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 LAS2Q8IYD9 372 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 FAM26EQ8N5C1 309 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 SRFBP1Q8NEF9 429 aaKnown RBP19.16■□□□□ 0.66
SS18-224ENST00000584083 SUN3Q8TAQ9 357 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 ADAMTS18Q8TE60 1221 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 KCNC2Q96PR1 638 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 MS4A8Q9BY19 250 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 PRTFDC1Q9NRG1 225 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 MRPS33Q9Y291 106 aaKnown RBP19.16■□□□□ 0.66
SS18-224ENST00000584083 MMACHCQ9Y4U1 282 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 ASH1LQ9NR48 2969 aaKnown RBP19.15■□□□□ 0.66
SS18-224ENST00000584083 TCRBV16S1A1N1A0A5B0 115 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 SIX3O95343 332 aaPredicted RBP19.15■□□□□ 0.66
SS18-224ENST00000584083 MYBL2P10244 700 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 COL6A2P12110 1019 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 PIK3CGP48736 1102 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 TAS2R50P59544 299 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 SLC13A2Q13183 592 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 GTF2H2Q13888 395 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 RCN2Q14257 317 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 PCBP2Q15366 365 aaKnown RBP eCLIP19.15■□□□□ 0.66
SS18-224ENST00000584083 EIF2S3LQ2VIR3 472 aaKnown RBP19.15■□□□□ 0.66
SS18-224ENST00000584083 TMEM35AQ53FP2 167 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 FHL5Q5TD97 284 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 H3F3CQ6NXT2 135 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 GTF2H2CQ6P1K8 395 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 CHSY3Q70JA7 882 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 GOLGA7Q7Z5G4 137 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 CRLF3Q8IUI8 442 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 PTGR2Q8N8N7 351 aaPredicted RBP19.15■□□□□ 0.66
SS18-224ENST00000584083 FAM47BQ8NA70 645 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 GRHL3Q8TE85 626 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 PHF21BQ96EK2 531 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 CMTM7Q96FZ5 175 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 ROGDIQ9GZN7 287 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 RNF32Q9H0A6 362 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 IPPKQ9H8X2 491 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 PRDM7Q9NQW5 492 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 ABI3Q9P2A4 366 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 TMCO1Q9UM00 188 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 SVILO95425 2214 aa19.15■□□□□ 0.66
SS18-224ENST00000584083 IGKV3D-11A0A0A0MRZ8 115 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 CLEC18AA5D8T8 446 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 OR5H15A6NDH6 313 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 RIPK2O43353 540 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 SMIM24O75264 130 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 FAM153BP0C7A2 387 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 ARL1P40616 181 aaPredicted RBP19.14■□□□□ 0.65
SS18-224ENST00000584083 LIM2P55344 173 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 SRSF1Q07955 248 aaKnown RBP eCLIP19.14■□□□□ 0.65
SS18-224ENST00000584083 ELOAQ14241 798 aaKnown RBP19.14■□□□□ 0.65
SS18-224ENST00000584083 MEP1AQ16819 746 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 AP5B1Q2VPB7 878 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 FAM153CQ494X1 144 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 LIPJQ5W064 366 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 RPUSD3Q6P087 351 aaKnown RBP19.14■□□□□ 0.65
SS18-224ENST00000584083 FAM180AQ6UWF9 173 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 CLEC18BQ6UXF7 455 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 BEST3Q8N1M1 668 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 SLC5A8Q8N695 610 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 CLEC18CQ8NCF0 446 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 LRRN4CLQ8ND94 238 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 PRR7Q8TB68 274 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 TBCDQ9BTW9 1192 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 XPR1Q9UBH6 696 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 ADGRE2Q9UHX3 823 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 DAPP1Q9UN19 280 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 PCDHGA11Q9Y5H2 935 aa19.14■□□□□ 0.65
SS18-224ENST00000584083 SPENQ96T58 3664 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 SAGE2PA6NJ88 616 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 SAP18O00422 153 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 RTCAO00442 366 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 CBX6O95503 412 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 EEF1DP29692 281 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 HNRNPFP52597 415 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 HSD17B7P56937 341 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 KHDRBS2Q5VWX1 349 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 METTL2BQ6P1Q9 378 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 UBE3DQ7Z6J8 389 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 ZNF595Q8IYB9 648 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 RNF175Q8N4F7 328 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 KIF2BQ8N4N8 673 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 TMEM52Q8NDY8 209 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 HUS1BQ8NHY5 278 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 ATP6V1E2Q96A05 226 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 MTERF1Q99551 399 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 BARD1Q99728 777 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms