RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 USP50Q70EL3 339 aaPredicted RBP10.16□□□□□ -0.78
RNF43-207ENST00000583753 C16orf62Q7Z3J2 963 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 OR6C4Q8NGE1 309 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 SNAPC3Q92966 411 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 SCLYQ96I15 445 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 CCDC115Q96NT0 180 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 IL17FQ96PD4 163 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 BBS4Q96RK4 519 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 TM9SF2Q99805 663 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 RIOK2Q9BVS4 552 aaKnown RBP10.16□□□□□ -0.78
RNF43-207ENST00000583753 ARHGAP39Q9C0H5 1083 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 SLC52A3Q9NQ40 469 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 B4GALT6Q9UBX8 382 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 ZNF639Q9UID6 485 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 MUTYHQ9UIF7 546 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 AMD1P17707 334 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 CSRP3P50461 194 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 EPHB3P54753 998 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 CCSMST1Q4G0I0 132 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 OR2G6Q5TZ20 316 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 MED27Q6P2C8 311 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 MTFR2Q6P444 385 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 RSPO2Q6UXX9 243 aaPredicted RBP10.16□□□□□ -0.78
RNF43-207ENST00000583753 OTOP2Q7RTS6 562 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 SLC46A3Q7Z3Q1 461 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 HUS1BQ8NHY5 278 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 SORCS1Q8WY21 1168 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 EFHD2Q96C19 240 aaPredicted RBP10.16□□□□□ -0.78
RNF43-207ENST00000583753 C11orf24Q96F05 449 aaPredicted RBP10.16□□□□□ -0.78
RNF43-207ENST00000583753 FCRL4Q96PJ5 515 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 HTATIP2Q9BUP3 242 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 CHIAQ9BZP6 476 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 ANKRA2Q9H9E1 313 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 FBXO8Q9NRD0 319 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 YARS2Q9Y2Z4 477 aaKnown RBP10.16□□□□□ -0.78
RNF43-207ENST00000583753 CMAHPQ9Y471 501 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 SSC5DA1L4H1 1573 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 CKAP5Q14008 2032 aa10.16□□□□□ -0.78
RNF43-207ENST00000583753 DOCK3Q8IZD9 2030 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 A0A1W2PPK0 400 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 DRGXA6NNA5 263 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 M0R082 166 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 TSPAN4O14817 238 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 LRRTM2O43300 516 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CELP19835 753 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 SDC2P34741 201 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 RPS19P39019 145 aaKnown RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 CTSOP43234 321 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 GNG2P59768 71 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 AP1S1P61966 158 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 MAP4K2Q12851 820 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 ZNF551Q7Z340 670 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 TMCO2Q7Z6W1 182 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 SERINC5Q86VE9 423 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 MARCH9Q86YJ5 346 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CHPFQ8IZ52 775 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 SLC37A3Q8NCC5 494 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 ATP6V1C2Q8NEY4 427 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 PJA1Q8NG27 643 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 WFDC5Q8TCV5 224 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CYB5D2Q8WUJ1 264 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 RELTQ969Z4 430 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 SLC22A12Q96S37 553 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.15□□□□□ -0.782e-6■■□□□ 14
RNF43-207ENST00000583753 NMNAT1Q9HAN9 279 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 QPCTLQ9NXS2 382 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 ZNF224Q9NZL3 707 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 MAT2BQ9NZL9 334 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 PSORS1C1Q9UIG5 152 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 MGAMO43451 1857 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 WDR81Q562E7 1941 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CLDN24A6NM45 220 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 I3L521 148 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 SLC30A4O14863 429 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 SSNA1O43805 119 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 NCR1O76036 304 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CYP17A1P05093 508 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 IL7P13232 177 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 PPIBP23284 216 aaKnown RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 PPP2R1BP30154 601 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 ASMTP46597 345 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CRISP1P54107 249 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 ABATP80404 500 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 PIN1Q13526 163 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 HEPACAMQ14CZ8 416 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 FBXO43Q4G163 708 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 AFMIDQ63HM1 303 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 CBLL1Q75N03 491 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 TMEM173Q86WV6 379 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 TEX12Q9BXU0 123 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 UCK2Q9BZX2 261 aa10.15□□□□□ -0.78
RNF43-207ENST00000583753 FAM120CQ9NX05 1096 aaKnown RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 CXXC1Q9P0U4 656 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 ZNF282Q9UDV7 671 aaPredicted RBP10.15□□□□□ -0.78
RNF43-207ENST00000583753 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.15□□□□□ -0.79
RNF43-207ENST00000583753 AREL1O15033 823 aa10.15□□□□□ -0.79
RNF43-207ENST00000583753 TSPAN6O43657 245 aa10.15□□□□□ -0.79
RNF43-207ENST00000583753 SLC16A8O95907 504 aa10.15□□□□□ -0.79
RNF43-207ENST00000583753 ALDH1A1P00352 501 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms