RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CLDN20P56880 219 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 RPL7AP62424 266 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 UBXN2AP68543 259 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SARNPP82979 210 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC34A1Q06495 639 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 AP1B1Q10567 949 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SNX1Q13596 522 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MORF4L2Q15014 288 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 PKN2Q16513 984 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ALG11Q2TAA5 492 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC9B1Q4ZJI4 515 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 PLEKHS1Q5SXH7 462 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SIGIRRQ6IA17 410 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM154Q6P9G4 183 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SH2D5Q6ZV89 423 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 NLRP9Q7RTR0 991 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 OTOAQ7RTW8 1153 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 HAUS6Q7Z4H7 955 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 PHF13Q86YI8 300 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 OR8H3Q8N146 312 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 CERS5Q8N5B7 392 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ALLCQ8N6M5 410 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 FBXL13Q8NEE6 735 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 GDAP1Q8TB36 358 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 WDR20Q8TBZ3 569 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MGARPQ8TDB4 240 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 HCAR2Q8TDS4 363 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 CHURC1Q8WUH1 139 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TEKT1Q969V4 418 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SENP5Q96HI0 755 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SMC6Q96SB8 1091 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TSC22D3Q99576 134 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 PIP5K1AQ99755 562 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF577Q9BSK1 485 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 APOL6Q9BWW8 343 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TEKT3Q9BXF9 490 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM192AQ9GZU8 254 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 C1orf21Q9H246 121 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TRABDQ9H4I3 376 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 KCNK13Q9HB14 408 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 PDE7BQ9NP56 450 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 PCDHB16Q9NRJ7 776 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ACSS1Q9NUB1 689 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TAS2R1Q9NYW7 299 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MRPL15Q9P015 296 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 WRAP73Q9P2S5 460 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 STX18Q9P2W9 335 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ASIC3Q9UHC3 531 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 GRID1Q9ULK0 1009 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 EXOC7Q9UPT5 735 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MRPL11Q9Y3B7 192 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 UMODL1Q5DID0 1318 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 LTBP1Q14766 1721 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 LOXHD1Q8IVV2 1947 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 EXOC1LA0A1B0GW35 172 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 A0A1W2PPM1 405 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 A0A1W2PRG0 241 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 LIPT2A6NK58 231 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 ENO4A6NNW6 628 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 PDLIM1O00151 329 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 UBE2CO00762 179 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 ATP2A1O14983 1001 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 NVLO15381 856 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 SMIM24O75264 130 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 SEC14L2O76054 403 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 PSMG1O95456 288 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 DLATP10515 647 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 RALAP11233 206 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 COX7A2P14406 83 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 CA4P22748 312 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 SP100P23497 879 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 EEF1DP29692 281 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 ALDH1B1P30837 517 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 PHBP35232 272 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 PCK1P35558 622 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 AHRP35869 848 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 GABRB2P47870 512 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 QARSP47897 775 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 ARCN1P48444 511 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 TAS2R40P59535 323 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 GPX6P59796 221 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 RPL26P61254 145 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 CDK16Q00536 496 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 SPOCK1Q08629 439 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 DNAJC3Q13217 504 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 HNRNPDQ14103 355 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 SNRNP35Q16560 246 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 TAZQ16635 292 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 MAPK6Q16659 721 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 DECR1Q16698 335 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 KCTD19Q17RG1 926 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 TAF1BQ53T94 588 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 RNASEH2BQ5TBB1 312 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 LIN9Q5TKA1 542 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 HHATQ5VTY9 493 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 AP1ARQ63HQ0 302 aa3.7□□□□□ -1.82
SMCHD1-208ENST00000583344 C18orf63Q68DL7 685 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms