RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SOAT1P35610 550 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 SLC19A1P41440 591 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 PRIM2P49643 509 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 CCT8P50990 548 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 PLA2G16P53816 162 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 MANFP55145 182 aaKnown RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 OR4D2P58180 307 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 TRA2BP62995 288 aaKnown RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 SLC9A5Q14940 896 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 HLA-BQ31612 363 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 SPDYE7PQ495Y7 208 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ZNF542PQ5EBM4 170 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 TOR1AIP1Q5JTV8 583 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 LRIF1Q5T3J3 769 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 IRAK1BP1Q5VVH5 260 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ADNP2Q6IQ32 1131 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ANKRD26P1Q6NSI1 321 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ZCCHC8Q6NZY4 707 aaKnown RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 PLD3Q8IV08 490 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 MFSD9Q8NBP5 474 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ZDHHC1Q8WTX9 485 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 NUDT8Q8WV74 236 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 NRG4Q8WWG1 115 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 LRTOMTQ8WZ04 291 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 RERGQ96A58 199 aaPredicted RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 SDCCAG3Q96C92 435 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 COQ8BQ96D53 544 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 DUS3LQ96G46 650 aaKnown RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 SLC6A18Q96N87 628 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 BBS4Q96RK4 519 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 SEPHS2Q99611 448 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 PKP2Q99959 881 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 BDH2Q9BUT1 245 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 SPATA9Q9BWV2 254 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 NLNQ9BYT8 704 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ROGDIQ9GZN7 287 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 POT1Q9NUX5 634 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ARMC1Q9NVT9 282 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ZNF624Q9P2J8 865 aaPredicted RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 CPNE7Q9UBL6 633 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 LRCH1Q9Y2L9 728 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 PCDHGB2Q9Y5G2 931 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 AP1M2Q9Y6Q5 423 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 FRYLO94915 3013 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 CACNA1AO00555 2505 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 RNF103-CHMP3A0A140T963 221 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FAM221BA6H8Z2 402 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 TMEM247A6NEH6 219 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 PRR19A6NJB7 356 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 B4DGG1 531 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 TLR4O00206 839 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CASQ2O14958 399 aaPredicted RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 PDPK1O15530 556 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FLRT2O43155 660 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ERI3O43414 337 aaKnown RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 TIPRLO75663 272 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 LDLRP01130 860 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 NTRK1P04629 796 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FURINP09958 794 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 SLC35G6P0C7Q6 338 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ZCCHC18P0CG32 403 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 DRD2P14416 443 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 EFNA1P20827 205 aaPredicted RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 ATP6V1B2P21281 511 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 PEX2P28328 305 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 NTSP30990 170 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CRATP43155 626 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ARRB1P49407 418 aaPredicted RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 ARFIP1P53367 373 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 HNRNPKP61978 463 aaKnown RBP eCLIP8.85□□□□□ -0.99
SS18-220ENST00000582092 EIF2B5Q13144 721 aaKnown RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 MED21Q13503 144 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 C1orf61Q13536 156 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 SELPLGQ14242 412 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FZD2Q14332 565 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CMPK2Q5EBM0 449 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 TPRG1LQ5T0D9 272 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 SWT1Q5T5J6 900 aaKnown RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 FAM71E1Q6IPT2 247 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ZBTB49Q6ZSB9 765 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FKBP9P1Q75LS8 142 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CAMKMTQ7Z624 323 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 IQCHQ86VS3 1027 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 TICAM1Q8IUC6 712 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 GALNT4Q8N4A0 578 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ANKRD53Q8N9V6 530 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CAMKVQ8NCB2 501 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 DEFB124Q8NES8 71 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ZFP28Q8NHY6 868 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 C1orf216Q8TAB5 229 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FBXO30Q8TB52 745 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 LMX1AQ8TE12 382 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 THAP11Q96EK4 314 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 REXO5Q96IC2 774 aaKnown RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 ZNF583Q96ND8 569 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 KCNC2Q96PR1 638 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CDC6Q99741 560 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 CPPED1Q9BRF8 314 aaPredicted RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 MENTQ9BUN1 341 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms