RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TDRPQ86YL5 185 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 CTAGE3PQ8IX95 158 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.6■□□□□ 0.73
CCDC42-203ENST00000581598 KRT78Q8N1N4 520 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 ARMC10Q8N2F6 343 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 TMEM178AQ8NBL3 297 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 PAFAH2Q99487 392 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 TMEM79Q9BSE2 394 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 ROPN1BQ9BZX4 212 aaPredicted RBP19.6■□□□□ 0.73
CCDC42-203ENST00000581598 CNOT10Q9H9A5 744 aaKnown RBP19.6■□□□□ 0.73
CCDC42-203ENST00000581598 ROPN1Q9HAT0 212 aaPredicted RBP19.6■□□□□ 0.73
CCDC42-203ENST00000581598 TXNDC16Q9P2K2 825 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 TAPBPO15533 448 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 CLEC3AO75596 197 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 CD46P15529 392 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 CD1DP15813 335 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 HPDP32754 393 aaPredicted RBP19.59■□□□□ 0.73
CCDC42-203ENST00000581598 ZNF844Q08AG5 666 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 SLBPQ14493 270 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCDC42-203ENST00000581598 TERF2Q15554 542 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 ZKSCAN8Q15776 578 aaPredicted RBP19.59■□□□□ 0.73
CCDC42-203ENST00000581598 C18orf21Q32NC0 220 aaPredicted RBP19.59■□□□□ 0.73
CCDC42-203ENST00000581598 ADPRMQ3LIE5 342 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 SULT1C3Q6IMI6 304 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 ARMC2Q8NEN0 867 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 NFAM1Q8NET5 270 aaPredicted RBP19.59■□□□□ 0.73
CCDC42-203ENST00000581598 DCAKDQ8WVC6 231 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 MS4A6EQ96DS6 147 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 WDR34Q96EX3 536 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 UBXN10Q96LJ8 280 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 CDCP1Q9H5V8 836 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 TRIM45Q9H8W5 580 aaPredicted RBP19.59■□□□□ 0.73
CCDC42-203ENST00000581598 CAB39LQ9H9S4 337 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 ZNF180Q9UJW8 692 aa19.59■□□□□ 0.73
CCDC42-203ENST00000581598 ITPR2Q14571 2701 aa19.58■□□□□ 0.73
CCDC42-203ENST00000581598 LRIT2A6NDA9 550 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 NEURL1O76050 574 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 MLYCDO95822 493 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 CCDC166P0CW27 439 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 STMN1P16949 149 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 MAOAP21397 527 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 EEF1DP29692 281 aaKnown RBP19.58■□□□□ 0.72
CCDC42-203ENST00000581598 CA7P43166 264 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 PMP22Q01453 160 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 RBPJQ06330 500 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 ADGRD1Q6QNK2 874 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 GPSM1Q86YR5 675 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 PDPRQ8NCN5 879 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 ADAMTS18Q8TE60 1221 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 THAP3Q8WTV1 239 aaPredicted RBP19.58■□□□□ 0.72
CCDC42-203ENST00000581598 FAR2Q96K12 515 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 NECTIN3Q9NQS3 549 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 DNAJC11Q9NVH1 559 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 WWOXQ9NZC7 414 aa19.58■□□□□ 0.72
CCDC42-203ENST00000581598 A0A088AWK7 358 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SYNDIG1LA6NDD5 238 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 NCF1BA6NI72 391 aaPredicted RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 NCF1CA8MVU1 366 aaPredicted RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 FAM227AF5H4B4 570 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 POC1B-GALNT4F8VUJ3 575 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 PHGDHO43175 533 aaKnown RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SASH3O75995 380 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SP1P08047 785 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 INHBAP08476 426 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 NCF1P14598 390 aaPredicted RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 ZNF10P21506 573 aaPredicted RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 HNRNPH1P31943 449 aaKnown RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 TRHRP34981 398 aaPredicted RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 MSH2P43246 934 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 MLF1P58340 268 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 BTN3A2P78410 334 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 IFFO1Q0D2I5 559 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 KRTCAP3Q53RY4 240 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 GRTP1Q5TC63 336 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SPINK14Q6IE38 97 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SLC25A25Q6KCM7 469 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 MTFR2Q6P444 385 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SCUBE1Q8IWY4 988 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 RIBC1Q8N443 379 aaPredicted RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 KIF2BQ8N4N8 673 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 EPS8L3Q8TE67 593 aaKnown RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 KIAA1191Q96A73 305 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 QRFPRQ96P65 431 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 ANKRD10Q9NXR5 420 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 LRFN1Q9P244 771 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 SUCOQ9UBS9 1254 aaKnown RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 PTBP2Q9UKA9 531 aaKnown RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 PPIEQ9UNP9 301 aaKnown RBP19.57■□□□□ 0.72
CCDC42-203ENST00000581598 CENPEQ02224 2701 aa19.57■□□□□ 0.72
CCDC42-203ENST00000581598 ANKDD1BA6NHY2 528 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 CLGNO14967 610 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 ATP8B1O43520 1251 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 CDH16O75309 829 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 STK16O75716 305 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 FAM155BO75949 473 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 TBX6O95947 436 aaPredicted RBP19.56■□□□□ 0.72
CCDC42-203ENST00000581598 TPP2P29144 1249 aaPredicted RBP19.56■□□□□ 0.72
CCDC42-203ENST00000581598 SPRP35270 261 aaPredicted RBP19.56■□□□□ 0.72
CCDC42-203ENST00000581598 SERPINB9P50453 376 aa19.56■□□□□ 0.72
CCDC42-203ENST00000581598 HSD17B7P56937 341 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms