RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FAM47EQ6ZV65 393 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 LUZP2Q86TE4 346 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC26A11Q86WA9 606 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 CCDC50Q8IVM0 306 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 C9orf106Q8NAJ2 232 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 OR6P1Q8NGX9 317 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 MBD3L2Q8NHZ7 208 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 NEIL3Q8TAT5 605 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF480Q8WV37 535 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 SKA2Q8WVK7 121 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 NCLNQ969V3 563 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 VMP1Q96GC9 406 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 WFIKKN1Q96NZ8 548 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 PKP4Q99569 1192 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 TIMP4Q99727 224 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 TSSK1BQ9BXA7 367 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 AMBRA1Q9C0C7 1298 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 P2RY12Q9H244 342 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 PROK2Q9HC23 129 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 PRM3Q9NNZ6 103 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 ABCF3Q9NUQ8 709 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 UTP6Q9NYH9 597 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 MYOTQ9UBF9 498 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 SH2B3Q9UQQ2 575 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 HYOU1Q9Y4L1 999 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 CLDN16Q9Y5I7 305 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC22A7Q9Y694 548 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 NINQ8N4C6 2090 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 hCG_1818297A0A087WSY0 165 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 A0A0G2JK05 382 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 LRRC3CA6NJW4 275 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 F8W8V4 182 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 TGFBR3LH3BV60 316 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 OIP5O43482 229 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 PSIP1O75475 530 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC16A8O95907 504 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 TNNT1P13805 278 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 CRYGSP22914 178 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 JAK1P23458 1154 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 VAMP1P23763 118 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 SOX18P35713 384 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 MC3RP41968 323 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 TRPC1P48995 793 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ATP5J2P56134 94 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 RPS15AP62244 130 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 MEF2AQ02078 507 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 VEZF1Q14119 521 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 PRPSAP1Q14558 356 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ARHGAP19Q14CB8 494 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 NFKBIBQ15653 356 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ANKRD20A4Q4UJ75 823 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 WIPI1Q5MNZ9 446 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 RNF187Q5TA31 235 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 BHLHB9Q6PI77 547 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 RTL4Q6ZR62 310 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 PLEKHM3Q6ZWE6 761 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ASPGQ86U10 573 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 LRRC25Q8N386 305 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 GOLM1Q8NBJ4 401 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 CAMKVQ8NCB2 501 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 FBXO15Q8NCQ5 510 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF740Q8NDX6 193 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 MAGEC3Q8TD91 643 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 HSPBAP1Q96EW2 488 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 PDLIM2Q96JY6 352 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF778Q96MU6 729 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 NAP1L5Q96NT1 182 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 SGPP1Q9BX95 441 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 SH2D2AQ9NP31 389 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ACKR4Q9NPB9 350 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 SACM1LQ9NTJ5 587 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 TMEM184CQ9NVA4 438 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 DDX56Q9NY93 547 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 ZFATQ9P243 1243 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 MARCH4Q9P2E8 410 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 LCMT1Q9UIC8 334 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 MED12LQ86YW9 2145 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 TENM1Q9UKZ4 2725 aa7.04□□□□□ -1.28
SMARCE1-217ENST00000580654 CD8B2A6NJW9 211 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 H7C0C1 242 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 PRMT5O14744 637 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 GPRIN2O60269 458 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 ZFAND5O76080 213 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 SERPING1P05155 500 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 H2AFZP0C0S5 128 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 EGR1P18146 543 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 CFPP27918 469 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 THBS2P35442 1172 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 SLCO1A2P46721 670 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 ATP5OP48047 213 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 HK2P52789 917 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 MYL5Q02045 173 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 ACVR1Q04771 509 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 DHX9Q08211 1270 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 DUSP8Q13202 625 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 KCNJ11Q14654 390 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms