RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 IKBKGQ9Y6K9 419 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 AP1M2Q9Y6Q5 423 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SPENQ96T58 3664 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 KIAA1549Q9HCM3 1950 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 ZFYVE26Q68DK2 2539 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SHANK1Q9Y566 2161 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 A0A0J9YVX5 310 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM238LA0A1B0GVL6 79 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 A0A1W2PQ72 361 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM120BA0PK00 339 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM150CB9EJG8 249 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 H0YIV9 168 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 AGRPO00253 132 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 COPEO14579 308 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 DSCR3O14972 297 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 RGS16O15492 202 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZW10O43264 779 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF749O43361 778 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ITM2AO43736 263 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 KDM1AO60341 852 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CCNT2O60583 730 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SRPX2O60687 465 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 UGDHO60701 494 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SNNO75324 88 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 KLF7O75840 302 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 RASSF9O75901 435 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 STK17BO94768 372 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 OR4F21O95013 312 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TNFSF15O95150 251 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CCNDBP1O95273 360 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 STATHP02808 62 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 JUNP05412 331 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CHRNGP07510 517 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 HIST1H2AGP0C0S8 130 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CPA3P15088 417 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CHN1P15882 459 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TSPAN8P19075 237 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 GNAZP19086 355 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 HIST1H2ADP20671 130 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 HRH2P25021 359 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CSTF2P33240 577 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 AHRP35869 848 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 EIF2S3P41091 472 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 STAT5AP42229 794 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SERPINB4P48594 390 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CCR8P51685 355 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CDH13P55290 713 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ITGA1P56199 1179 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 FOXL2P58012 376 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 MAGOHP61326 146 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 RPS15AP62244 130 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ACY1Q03154 408 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CLCQ05315 142 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CYP4F3Q08477 520 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 IFFO1Q0D2I5 559 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 GALNT1Q10472 559 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PRKAA1Q13131 559 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CHIT1Q13231 466 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 GTF2H2Q13888 395 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SLBPQ14493 270 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TGIF1Q15583 401 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SMN1Q16637 294 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC153Q494R4 210 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TCHHL1Q5QJ38 904 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 WASHC2DQ5SRD0 308 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 LIPMQ5VYY2 423 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 RHBDD2Q6NTF9 364 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ARMC6Q6NXE6 501 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 GTF2H2CQ6P1K8 395 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 KLC3Q6P597 504 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 UNQ6494/PRO21346Q6UXR6 183 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF793Q6ZN11 406 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZCCHC23Q6ZST2 131 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 FRA10AC1Q70Z53 315 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 HDXQ7Z353 690 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CROCCP2Q86T23 111 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 C17orf64Q86WR6 236 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZFAND4Q86XD8 727 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PROSER1Q86XN7 944 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 DSELQ8IZU8 1212 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 RAB42Q8N4Z0 105 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TEX9Q8N6V9 391 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 OR7G3Q8NG95 312 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 OR4F6Q8NGB9 312 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 OR8K5Q8NH50 307 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ADAMTS17Q8TE56 1095 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SNRNP27Q8WVK2 155 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 NKD1Q969G9 470 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ALKBH8Q96BT7 664 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 NXPE2Q96DL1 559 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 MS4A6EQ96DS6 147 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PHF21BQ96EK2 531 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PTCD3Q96EY7 689 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 HIST1H2AHQ96KK5 128 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PKNOX2Q96KN3 472 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 FCRL1Q96LA6 429 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ATP6V1G3Q96LB4 118 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF578Q96N58 590 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TAAR9Q96RI9 348 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms