RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 C1orf50Q9BV19 199 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 SGPP1Q9BX95 441 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 BRINP2Q9C0B6 783 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 TWSG1Q9GZX9 223 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 WDR41Q9HAD4 459 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 INTS7Q9NVH2 962 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 PDP2Q9P2J9 529 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 BAIAP2L1Q9UHR4 511 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 GPR45Q9Y5Y3 372 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 NRP2O60462 931 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 SEMA7AO75326 666 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 DNAJB5O75953 348 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 CCNDBP1O95273 360 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 DLGAP3O95886 979 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 PDGFAP04085 211 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 C1GALT1C1LP0DN25 315 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 PCNAP12004 261 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 TYRP1P17643 537 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 EPORP19235 508 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 SERPINB1P30740 379 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 CPOXP36551 454 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 FASLGP48023 281 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 POLR2JP52435 117 aaKnown RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 DIO3P55073 304 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 FBXW10Q5XX13 1052 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 ATG9BQ674R7 924 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 REP15Q6BDI9 236 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 CYP20A1Q6UW02 462 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 Q6ZSR9 355 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 SLC9B2Q86UD5 537 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 FAM13CQ8NE31 585 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 UTP4Q969X6 686 aaKnown RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 CXorf40BQ96DE9 158 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 METTL2AQ96IZ6 378 aaKnown RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 INSM2Q96T92 566 aaPredicted RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 HBEGFQ99075 208 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 BRF2Q9HAW0 419 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 ASIC5Q9NY37 505 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 TBC1D29Q9UFV1 150 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 GIMAP2Q9UG22 337 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 ADGRE2Q9UHX3 823 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 MAPRE3Q9UPY8 281 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 POLR3HQ9Y535 204 aaPredicted RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.7□□□□□ -0.86
SS18-210ENST00000578700 MED13Q9UHV7 2174 aa9.7□□□□□ -0.86
SS18-210ENST00000578700 ANKRD17O75179 2603 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 KCNE1BA0A087WTH5 132 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 A0A1W2PP18 115 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 KRT87PA6NCN2 255 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 ATP6V1G2O95670 118 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 NPPAP01160 153 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 CCNYL3P0C7X3 344 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 RNF224P0DH78 156 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 MTHFD1P11586 935 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 ACPPP15309 386 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 NPPBP16860 134 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 AMD1P17707 334 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 PRPH2P23942 346 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 RAB28P51157 221 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 CCL11P51671 97 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 CCR8P51685 355 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 NEK2P51955 445 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 CLNS1AP54105 237 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 GFERP55789 205 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 HMGCS1Q01581 520 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 DDX39BQ13838 428 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 SLBPQ14493 270 aaKnown RBP eCLIP9.69□□□□□ -0.86
SS18-210ENST00000578700 ZXDCQ2QGD7 858 aaPredicted RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 EIF2S3LQ2VIR3 472 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 CRTC2Q53ET0 693 aaPredicted RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 DOPEY1Q5JWR5 2465 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 ZNF787Q6DD87 383 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 IYDQ6PHW0 289 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 NXPE4Q6UWF7 544 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 HACD2Q6Y1H2 254 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 SLCO4C1Q6ZQN7 724 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 PLXDC1Q8IUK5 500 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 TRIM48Q8IWZ4 208 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 FBXW8Q8N3Y1 598 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 GALNT11Q8NCW6 608 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 FBXO27Q8NI29 283 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 NEIL2Q969S2 332 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 SPDL1Q96EA4 605 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 WDR34Q96EX3 536 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 TGM7Q96PF1 710 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 OR6C1Q96RD1 312 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 NPAS2Q99743 824 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 HOPXQ9BPY8 73 aaPredicted RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 AIF1LQ9BQI0 150 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 ACPTQ9BZG2 426 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 DPY30Q9C005 99 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 PITHD1Q9GZP4 211 aaPredicted RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 PELI2Q9HAT8 420 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 SPAG4Q9NPE6 437 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 FARSBQ9NSD9 589 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms