RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PLIN5Q00G26 463 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 MRM1Q6IN84 353 aaKnown RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 DNAJC14Q6Y2X3 702 aaPredicted RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 SPRED1Q7Z699 444 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 TICAM1Q8IUC6 712 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 C10orf67Q8IYJ2 551 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 DNAJC22Q8N4W6 341 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 RNF148Q8N7C7 305 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 NAT6Q93015 286 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 SMIM10Q96HG1 83 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 ANKRD27Q96NW4 1050 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 GBP5Q96PP8 586 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 SH3GL1Q99961 368 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 CMTM6Q9NX76 183 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 VAPAQ9P0L0 249 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 CD300AQ9UGN4 299 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 PACSIN3Q9UKS6 424 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 AP3M1Q9Y2T2 418 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 R4GN57 208 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 DNAH14Q0VDD8 3507 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 TRBV5-3A0A0A0MS03 114 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 PRORSD1PA6NEY8 169 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 KIF1CO43896 1103 aaKnown RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 SH3BP5O60239 455 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 DNAJA2O60884 412 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 SORBS2O94875 1100 aaKnown RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 MYF5P13349 255 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 CERS1P27544 350 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 EEFSECP57772 596 aaKnown RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 VSX2P58304 361 aaPredicted RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 BTN3A2P78410 334 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 SLAMF1Q13291 335 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 AMZ1Q400G9 498 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 ZNF385BQ569K4 471 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 TMEM214Q6NUQ4 689 aaKnown RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 MCATQ8IVS2 390 aaKnown RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 AMER3Q8N944 861 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 Q8N9G6 341 aaPredicted RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 ZCCHC10Q8TBK6 192 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 PANX1Q96RD7 426 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 SERINC2Q96SA4 455 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 INPP5KQ9BT40 448 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 GTPBP2Q9BX10 602 aaKnown RBP17.62■□□□□ 0.41
PRKCA-203ENST00000578063 ARRDC1-AS1Q9H2J1 176 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 PDE7BQ9NP56 450 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 C11orf16Q9NQ32 467 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 SOHLH2Q9NX45 425 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 EHD3Q9NZN3 535 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 NEUROG3Q9Y4Z2 214 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
PRKCA-203ENST00000578063 LY6G6EA0A0G2JKS1 128 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 KHNYNO15037 678 aaKnown RBP17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ANP32DO95626 131 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 HSD17B1P14061 328 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 HOXB9P17482 250 aaPredicted RBP17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ENGP17813 658 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ALOX12P18054 663 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 CD1CP29017 333 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 RABL3Q5HYI8 236 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 EID2Q8N6I1 236 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 OR2I1PQ8NGU4 316 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ASB9Q96DX5 294 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 TEX10Q9NXF1 929 aaPredicted RBP17.61■□□□□ 0.41
PRKCA-203ENST00000578063 SLC25A37Q9NYZ2 338 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 BCAP29Q9UHQ4 241 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ASB4Q9Y574 426 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 SLC22A7Q9Y694 548 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 U3KQA8 63 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 MDC1Q14676 2089 aaKnown RBP17.61■□□□□ 0.41
PRKCA-203ENST00000578063 IGHV5-51A0A0C4DH38 117 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 EME2A4GXA9 379 aaPredicted RBP17.61■□□□□ 0.41
PRKCA-203ENST00000578063 PRR33A8MZF0 331 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 B3GALT4O96024 378 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ZNF883P0CG24 379 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 PTPN6P29350 595 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 CSF2RBP32927 897 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ALDH9A1P49189 494 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 ATXN3P54252 364 aaPredicted RBP17.61■□□□□ 0.41
PRKCA-203ENST00000578063 DEFB110Q30KQ9 67 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 RUNDC3AQ59EK9 446 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 NDUFAF5Q5TEU4 345 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 FBXW10Q5XX13 1052 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 GUSBP11Q6P575 273 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 PRSS42Q7Z5A4 293 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 MSRB3Q8IXL7 192 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 FAM47BQ8NA70 645 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 JADE3Q92613 823 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 MIEF2Q96C03 454 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 SEMA5BQ9P283 1151 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 PLCL2Q9UPR0 1127 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 PCDHB14Q9Y5E9 798 aa17.61■□□□□ 0.41
PRKCA-203ENST00000578063 B3GALT2O43825 422 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 ENTPD5O75356 428 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 TCN1P20061 433 aaPredicted RBP17.6■□□□□ 0.41
PRKCA-203ENST00000578063 CDKN2CP42773 168 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 BNIP2Q12982 314 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 SQSTM1Q13501 440 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 TRIM25Q14258 630 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms