RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 NAA11Q9BSU3 229 aaPredicted RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ALKBH7Q9BT30 221 aaPredicted RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 LRRCC1Q9C099 1032 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 C5orf66Q9H5L9 145 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 LMAN1LQ9HAT1 526 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 SH3GLB2Q9NR46 395 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 DEPPQ9NTK1 212 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 SNX7Q9UNH6 387 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 VSIG4Q9Y279 399 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 MRPL11Q9Y3B7 192 aaKnown RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 NAALAD2Q9Y3Q0 740 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 A0A0B4J203 849 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 A0A1W2PPW3 197 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 TCP10L2B9ZVM9 353 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 SLC7A4O43246 635 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 ZNF749O43361 778 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 NME6O75414 186 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 KBTBD11O94819 623 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 SIX3O95343 332 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 FGF19O95750 216 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 PDGFBP01127 241 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 APOA4P06727 396 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 GIG44P09565 113 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 ERCC2P18074 760 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 EEF1DP29692 281 aaKnown RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 SLC1A4P43007 532 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 CRKLP46109 303 aaKnown RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 ZNF41P51814 821 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 TNK1Q13470 666 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 MUC21Q5SSG8 566 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 MPP7Q5T2T1 576 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 LEMD1Q68G75 181 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 TXNRD3NBQ6F5E7 133 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 CAVIN1Q6NZI2 390 aaKnown RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 C11orf57Q6ZUT1 292 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 CCDC186Q7Z3E2 898 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 KRT77Q7Z794 578 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 TMEM99Q8N816 258 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 OR6F1Q8NGZ6 308 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 OR4Q3Q8NH05 313 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 RHOXF1Q8NHV9 184 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 C8orf46Q8TAG6 207 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 MRPS27Q92552 414 aaKnown RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 RMDN1Q96DB5 314 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 ALKBH3Q96Q83 286 aaPredicted RBP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 BCCIPQ9P287 314 aaKnown RBP eCLIP1.76□□□□□ -2.13
TOP2A-202ENST00000577541 DNAJB9Q9UBS3 223 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 AUP1Q9Y679 476 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 COLEC10Q9Y6Z7 277 aa1.76□□□□□ -2.13
TOP2A-202ENST00000577541 SALL1Q9NSC2 1324 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 HCFC1P51610 2035 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 ANXA2P2A6NMY6 339 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 E9PAM4 449 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 FLRT2O43155 660 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 MLNRO43193 412 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 FCGR3BO75015 233 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 GGPS1O95749 300 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 MOCS2O96007 188 aaPredicted RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 PENKP01210 267 aaPredicted RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 KRT6AP02538 564 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 KRT6BP04259 564 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 STAG3L1P0CL83 205 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 FDPSP14324 419 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 IFNAR1P17181 557 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 ADRA2CP18825 462 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 CTNNA2P26232 953 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 RPL9P32969 192 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 PRKCIP41743 596 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 KRT6CP48668 564 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 NPY4RP50391 375 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 ADARP55265 1226 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 EVCP57679 992 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 PTENP60484 403 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 MZT1Q08AG7 82 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 PRPF4BQ13523 1007 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 FASTKQ14296 549 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 PCK2Q16822 640 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 NHLRC3Q5JS37 347 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 GALNTL5Q7Z4T8 443 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 SLFN11Q7Z7L1 901 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 VASH2Q86V25 355 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 VSIG1Q86XK7 387 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 HIPK1Q86Z02 1210 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 TIGD4Q8IY51 512 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 CD177Q8N6Q3 437 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 GOT1L1Q8NHS2 421 aaPredicted RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 CNDP2Q96KP4 475 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 B3GALT6Q96L58 329 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 AK8Q96MA6 479 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 TSSK2Q96PF2 358 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 CCM2Q9BSQ5 444 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 KATNB1Q9BVA0 655 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 GTPBP2Q9BX10 602 aaKnown RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 ALDH8A1Q9H2A2 487 aaPredicted RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 RABEP2Q9H5N1 569 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 WDR41Q9HAD4 459 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 RAB9BQ9NP90 201 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 MIS18AQ9NYP9 233 aa1.75□□□□□ -2.13
TOP2A-202ENST00000577541 CFDP1Q9UEE9 299 aaPredicted RBP1.75□□□□□ -2.13
TOP2A-202ENST00000577541 SLC6A5Q9Y345 797 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms