RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SCN5AQ14524 2016 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 TRBV4-1A0A0J9YWV2 114 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 BCLAF3A2AJT9 711 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 ASB14A6NK59 587 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CYSRT1A8MQ03 144 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 PRSS46E5RG02 174 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 E5RGE8 158 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 H7C423 109 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 ZNF195O14628 629 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 FPGTO14772 594 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 INPP4BO15327 924 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 PRPSAP2O60256 369 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SAP30O75446 220 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 GMNNO75496 209 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 PRDM1O75626 825 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 FGF19O95750 216 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 GAS8O95995 478 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CGAP01215 116 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 KRT5P13647 590 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 ETS1P14921 441 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 C4BPBP20851 252 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SOX3P41225 446 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 NKX2-1P43699 371 aaPredicted RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 KHKP50053 298 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CLCN4P51793 760 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CRYBA2P53672 197 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CASP9P55211 416 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 XGP55808 180 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 HSD17B7P56937 341 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 OR1D5P58170 312 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 ABCE1P61221 599 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 CSNK2BP67870 215 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 DHODHQ02127 395 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 GCKRQ14397 625 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 TMEM187Q14656 261 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 MAPK11Q15759 364 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 STXBP2Q15833 593 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 EXT1Q16394 746 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 DUSP5Q16690 384 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 MS4A18Q3C1V0 323 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 TAF1BQ53T94 588 aaPredicted RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 ZNF542PQ5EBM4 170 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CES4AQ5XG92 561 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 ETFRF1Q6IPR1 90 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CD164L2Q6UWJ8 174 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CYP4V2Q6ZWL3 525 aaPredicted RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 TRMT11Q7Z4G4 463 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 NLRP14Q86W24 1093 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 ZFAND4Q86XD8 727 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 ERC1Q8IUD2 1116 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SERPINA12Q8IW75 414 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 TEX26Q8N6G2 289 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 RTL3Q8N8U3 475 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 LRTM2Q8N967 370 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CCNYQ8ND76 341 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 OR5M9Q8NGP3 310 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SPPL2AQ8TCT8 520 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 URGCPQ8TCY9 931 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 RNASE8Q8TDE3 154 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 GTF3AQ92664 365 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 AP2M1Q96CW1 435 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 NXPE2Q96DL1 559 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 MOCOSQ96EN8 888 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 RBM41Q96IZ5 413 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 AGAP4Q96P64 663 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 RUFY1Q96T51 708 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SPAG8Q99932 426 aaPredicted RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 RBM4BQ9BQ04 359 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 OVOL2Q9BRP0 275 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CCM2Q9BSQ5 444 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SPXQ9BT56 116 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 PAPOLGQ9BWT3 736 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 TRIM15Q9C019 465 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 MARCH7Q9H992 704 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 LIN28AQ9H9Z2 209 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 RNPEPL1Q9HAU8 725 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 UBE2TQ9NPD8 197 aaPredicted RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 SPHK2Q9NRA0 654 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 CYP39A1Q9NYL5 469 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 NLGN3Q9NZ94 848 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 NDUFA13Q9P0J0 144 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 KLK11Q9UBX7 282 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 SH3BGRL2Q9UJC5 107 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 TMCC3Q9ULS5 477 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 NSG2Q9Y328 171 aa2.17□□□□□ -2.06
COPS3-213ENST00000577210 DHX29Q7Z478 1369 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.16□□□□□ -2.06
COPS3-213ENST00000577210 A0A1W2PR80 420 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 H0YIG0 161 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 K7EQD1 137 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 CACNB4O00305 520 aaPredicted RBP2.16□□□□□ -2.06
COPS3-213ENST00000577210 TXNL1O43396 289 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 KIF5CO60282 957 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 ZNF821O75541 412 aaPredicted RBP2.16□□□□□ -2.06
COPS3-213ENST00000577210 ZFAND5O76080 213 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 GLCEO94923 617 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 PTBP3O95758 552 aaKnown RBP2.16□□□□□ -2.06
COPS3-213ENST00000577210 GUCA1CO95843 209 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 MT-ND2P03891 347 aa2.16□□□□□ -2.06
COPS3-213ENST00000577210 CCDC192P0DO97 292 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms