RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 POLR1DQ9Y2S0 133 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 BOLA1Q9Y3E2 137 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAAHO00519 579 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 IFNA6P05013 189 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ATP1B2P14415 290 aaPredicted RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GUCA1AP43080 201 aaPredicted RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RGS1Q08116 209 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 BTG3Q14201 252 aaPredicted RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 C4orf46Q504U0 113 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GTF2IRD2BQ6EKJ0 949 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GTF2IRD2Q86UP8 949 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 LACC1Q8IV20 430 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 CELF2-AS1Q8N7Q2 184 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 DTX3Q8N9I9 347 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR6C4Q8NGE1 309 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR5H6Q8NGV6 325 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 COQ8AQ8NI60 647 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 MAL2Q969L2 176 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 CTRCQ99895 268 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 FBXW2Q9UKT8 454 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 SARDHQ9UL12 918 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 DLGAP4Q9Y2H0 992 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 PCDHGB1Q9Y5G3 927 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 A6NL46 340 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 CAPNS1P04632 268 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 TNFRSF1BP20333 461 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 PLAG1Q6DJT9 500 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAAH2Q6GMR7 532 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 MSANTD1Q6ZTZ1 278 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAM109AQ8N4B1 249 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GATAD2BQ8WXI9 593 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 LRR1Q96L50 414 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 TRIB3Q96RU7 358 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 NEURL2Q9BR09 285 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 SUV39H2Q9H5I1 410 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RANGRFQ9HD47 186 aaPredicted RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 OSER1Q9NX31 292 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 A0A0G2JN53 185 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 LRRN3E7EW58 273 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 UBFD1O14562 309 aaKnown RBP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 PCDH17O14917 1159 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR10H2O60403 315 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 FHP07954 510 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 B3GNT7Q8NFL0 401 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARNT2Q9HBZ2 717 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC35C2Q9NQQ7 365 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 IMP3Q9NV31 184 aaKnown RBP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 C2orf92A0A1B0GVN3 265 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ANXA2P2A6NMY6 339 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 TMX2-CTNND1H3BSU7 103 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 J3QLW9 94 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 TEX28O15482 410 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 LDB2O43679 373 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ANXA2P07355 339 aaKnown RBP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF19P17023 458 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 NCBP2P52298 156 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 SYT6Q5T7P8 510 aaPredicted RBP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZFP41Q8N8Y5 198 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR9Q2Q8NGE9 314 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ASB12Q8WXK4 309 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 SUSD6Q92537 303 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 HDHD5Q9BXW7 423 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 TJP1Q07157 1748 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ETFAP13804 333 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 PIGAP37287 484 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ST3GAL3Q11203 375 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 LIPJQ5W064 366 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC27A4Q6P1M0 643 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 COMMD7Q86VX2 200 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF548Q8NEK5 533 aaPredicted RBP12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 CACNG6Q9BXT2 260 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 BRINP2Q9C0B6 783 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR51I1Q9H343 314 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 PLCL2Q9UPR0 1127 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 KANTRA0A1W2PQU2 76 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 URADA6NGE7 173 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 SSTR4P31391 388 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 SOX3P41225 446 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAM110CQ1W6H9 321 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 CPZQ66K79 652 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 CD200R1Q8TD46 325 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 EPYCQ99645 322 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
PCDHGB3-201ENST00000576222 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 LAMP1P11279 417 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 CDKN1CP49918 316 aaPredicted RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 MICAQ29983 383 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARL14EPQ8N8R7 260 aaPredicted RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 GGHQ92820 318 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 C16orf70Q9BSU1 422 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 M0R129 80 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms