RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PCBD2Q9H0N5 130 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 C10orf88Q9H8K7 445 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 PIH1D1Q9NWS0 290 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 QPCTLQ9NXS2 382 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 GALNT8Q9NY28 637 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 ZNF226Q9NYT6 803 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 MYOTQ9UBF9 498 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 RIMKLBQ9ULI2 386 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 NENFQ9UMX5 172 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 R3HDM2Q9Y2K5 976 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMG6-219ENST00000575663 ATG4BQ9Y4P1 393 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 NPFFR2Q9Y5X5 522 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 PHF3Q92576 2039 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 MBD3L3A6NE82 208 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 URADA6NGE7 173 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 A8MV72 311 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 E5RI56 91 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 WWP2O00308 870 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZSCAN12O43309 604 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 CHST10O43529 356 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 CD5LO43866 347 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 CEP104O60308 925 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TMCC2O75069 709 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PSIP1O75475 530 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 NDUFS3O75489 264 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TMIGD3P0DMS9 266 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 RNH1P13489 461 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 ALOX12P18054 663 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 COMTP21964 271 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 CPOXP36551 454 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 COILP38432 576 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 AGFG1P52594 562 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 DIO3P55073 304 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ADARP55265 1226 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 EIF3BP55884 814 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 WNT3P56703 355 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TBPL1P62380 186 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 KCNJ2P63252 427 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 OLR1P78380 273 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 BTG2P78543 158 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 FOXO1Q12778 655 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 RCAN2Q14206 197 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 SEMA3AQ14563 771 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ETFDHQ16134 617 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PARP6Q2NL67 630 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 KLHL38Q2WGJ6 581 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZNF750Q32MQ0 723 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TTLL9Q3SXZ7 439 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 RNF187Q5TA31 235 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 POMZP3Q6PJE2 187 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 HSDL2Q6YN16 418 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZNF662Q6ZS27 426 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZNF534Q76KX8 674 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 LUZP2Q86TE4 346 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 LDB1Q86U70 411 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 CAND1Q86VP6 1230 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 C17orf64Q86WR6 236 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 RCOR2Q8IZ40 523 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TBC1D19Q8N5T2 526 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZNF441Q8N8Z8 693 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZNF740Q8NDX6 193 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 MBD3L2Q8NHZ7 208 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 PPP1R14CQ8TAE6 165 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ACTL9Q8TC94 416 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PEX13Q92968 403 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TM4SF19Q96DZ7 209 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PIK3IP1Q96FE7 263 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 SCYL1Q96KG9 808 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TRIB1Q96RU8 372 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 C19orf24Q9BVV8 132 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 SFXN3Q9BWM7 321 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 HEMGNQ9BXL5 484 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PRDM14Q9GZV8 571 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 P2RY12Q9H244 342 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 SLC6A15Q9H2J7 730 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 EPB41L4BQ9H329 900 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ACBD3Q9H3P7 528 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 CLK4Q9HAZ1 481 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 ZFP64Q9NPA5 681 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ACKR4Q9NPB9 350 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 ADAP2Q9NPF8 381 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 NECTIN3Q9NQS3 549 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 YAE1D1Q9NRH1 226 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PNO1Q9NRX1 252 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 TRMT1Q9NXH9 659 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 TUBA8Q9NY65 449 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 JKAMPQ9P055 326 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 C6orf203Q9P0P8 240 aaPredicted RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 SLC2A6Q9UGQ3 507 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 CDC42EP3Q9UKI2 254 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 PPIEQ9UNP9 301 aaKnown RBP5.43□□□□□ -1.54
SMG6-219ENST00000575663 VPS9D1Q9Y2B5 631 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 TESMINQ9Y4I5 508 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 HYOU1Q9Y4L1 999 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 MMACHCQ9Y4U1 282 aa5.43□□□□□ -1.54
SMG6-219ENST00000575663 HRNRQ86YZ3 2850 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms