RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 LRRC70Q7Z2Q7 622 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 MMGT1Q8N4V1 131 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 APCDD1LQ8NCL9 501 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 KCTD4Q8WVF5 259 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 NXNL1Q96CM4 212 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 TRIM45Q9H8W5 580 aaPredicted RBP16.31■□□□□ 0.2
SMG6-214ENST00000573827 NMRAL1Q9HBL8 299 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 KCMF1Q9P0J7 381 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 ZNF223Q9UK11 482 aaPredicted RBP16.31■□□□□ 0.2
SMG6-214ENST00000573827 OSGIN2Q9Y236 505 aa16.31■□□□□ 0.2
SMG6-214ENST00000573827 CLGNO14967 610 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 KLK8O60259 260 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 ALDOAP04075 364 aaKnown RBP16.3■□□□□ 0.2
SMG6-214ENST00000573827 PPP2R1BP30154 601 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 PLA2G16P53816 162 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 RAB38P57729 211 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 PMP22Q01453 160 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 CHIT1Q13231 466 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 ELOAQ14241 798 aaKnown RBP16.3■□□□□ 0.2
SMG6-214ENST00000573827 ZNF766Q5HY98 468 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 ZNF793Q6ZN11 406 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 LAS2Q8IYD9 372 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 SNX31Q8N9S9 440 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 RHEBL1Q8TAI7 183 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 ZNF473Q8WTR7 871 aaKnown RBP16.3■□□□□ 0.2
SMG6-214ENST00000573827 EXT2Q93063 718 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 MAGEB10Q96LZ2 347 aaPredicted RBP16.3■□□□□ 0.2
SMG6-214ENST00000573827 C5orf34Q96MH7 638 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 F2RL3Q96RI0 385 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 CSF3RQ99062 836 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 MS4A8Q9BY19 250 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 REXO4Q9GZR2 422 aaKnown RBP16.3■□□□□ 0.2
SMG6-214ENST00000573827 ANKRD10Q9NXR5 420 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 CACNA1DQ01668 2161 aa16.3■□□□□ 0.2
SMG6-214ENST00000573827 FBN2P35556 2912 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 A1L4Q6 167 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 ASPDHA6ND91 283 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 GABRR3A8MPY1 467 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 CCNT2O60583 730 aaKnown RBP16.29■□□□□ 0.2
SMG6-214ENST00000573827 SCELO95171 688 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 CERS1P27544 350 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 MAGEA12P43365 314 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 LIM2P55344 173 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 KCNK10P57789 538 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 MLF1P58340 268 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 TERF2Q15554 542 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 OR1C1Q15619 314 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 MROH9Q5TGP6 573 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 SPINK14Q6IE38 97 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 RAPH1Q70E73 1250 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 RPS19BP1Q86WX3 136 aaKnown RBP16.29■□□□□ 0.2
SMG6-214ENST00000573827 SLC5A8Q8N695 610 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 DNAJB8Q8NHS0 232 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 ISL2Q96A47 359 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 SNX15Q9NRS6 342 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 DAPP1Q9UN19 280 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 ACOT9Q9Y305 439 aa16.29■□□□□ 0.2
SMG6-214ENST00000573827 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 ANKDD1BA6NHY2 528 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 K7EPI3 171 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 PSMD12O00232 456 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 CDK2AP1O14519 115 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 LRRTM2O43300 516 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 URI1O94763 535 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 RASAL1O95294 804 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 UQCRHP07919 91 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 TPP2P29144 1249 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 TRHRP34981 398 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 HSD17B7P56937 341 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 IRF8Q02556 426 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 LAPTM5Q13571 262 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 NAA30Q147X3 362 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 MAMDC2Q7Z304 686 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 CCDC91Q7Z6B0 441 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 TBC1D1Q86TI0 1168 aaPredicted RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 SIAH3Q8IW03 269 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 CYP4X1Q8N118 509 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 CCT6BQ92526 530 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 RELTQ969Z4 430 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 FAR2Q96K12 515 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 SERINC2Q96SA4 455 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 UTP23Q9BRU9 249 aaKnown RBP16.28■□□□□ 0.2
SMG6-214ENST00000573827 CDCP1Q9H5V8 836 aa16.28■□□□□ 0.2
SMG6-214ENST00000573827 A0A087X1B8 175 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 LRRC14BA6NHZ5 514 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 TMEM200CA6NKL6 621 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 A8MUA0 341 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 SUPT3HB4E1H0 165 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 B3GALT2O43825 422 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 SUPT3HO75486 399 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 MTTPP55157 894 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 SETDB1Q15047 1291 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 PAGE2BQ5JRK9 111 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 ZNF595Q8IYB9 648 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 PLD6Q8N2A8 252 aaKnown RBP16.27■□□□□ 0.2
SMG6-214ENST00000573827 FAM47BQ8NA70 645 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 B3GNT7Q8NFL0 401 aa16.27■□□□□ 0.2
SMG6-214ENST00000573827 OR7G3Q8NG95 312 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms