RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 COPZ1P61923 177 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 EEF1A2Q05639 463 aaKnown RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 CRB2Q5IJ48 1285 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 AGAP6Q5VW22 663 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 CCDC80Q76M96 950 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 SLC44A2Q8IWA5 706 aaPredicted RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 OR56A3Q8NH54 315 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 AGAP4Q96P64 663 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 VPS35Q96QK1 796 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 TP63Q9H3D4 680 aaPredicted RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 ENOPH1Q9UHY7 261 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 PDZK1P1A8MUH7 402 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 MPZL2O60487 215 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 GPX5O75715 221 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 KRT8P05787 483 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 CRISP1P54107 249 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 PCDH1Q08174 1060 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 TSTA3Q13630 321 aaPredicted RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 SSX1Q16384 188 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 ZNF630Q2M218 657 aaPredicted RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 FRMPD2BQ6IN97 320 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 KLHL17Q6TDP4 642 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 GDPD4Q6W3E5 623 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 SLCO4C1Q6ZQN7 724 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 COMMD6Q7Z4G1 85 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.97□□□□□ -0.01
NUP88-207ENST00000573584 CHAC2Q8WUX2 184 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 AUTS2Q8WXX7 1259 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 PPCDCQ96CD2 204 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 TRNT1Q96Q11 434 aaKnown RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 RIOK2Q9BVS4 552 aaKnown RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 CRNNQ9UBG3 495 aaPredicted RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 ENPP4Q9Y6X5 453 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 TRBC2A0A5B9 178 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 ZAR1LA6NP61 321 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 CTSCP53634 463 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 C2orf80Q0P641 193 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 RAB33AQ14088 237 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 DOC2BQ14184 412 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 NDUFA5Q16718 116 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 SPOUT1Q5T280 376 aaKnown RBP14.96□□□□□ -0.01
NUP88-207ENST00000573584 ARMCX6Q7L4S7 300 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 OR8H2Q8N162 312 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 CCDC32Q9BV29 185 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 CNPPD1Q9BV87 410 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 GPBP1L1Q9HC44 474 aaPredicted RBP14.96□□□□□ -0.01
NUP88-207ENST00000573584 EXOSC4Q9NPD3 245 aaKnown RBP14.96□□□□□ -0.01
NUP88-207ENST00000573584 FTSJ1Q9UET6 329 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 SLC25A13Q9UJS0 675 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 FADS2P1A8MWK0 482 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 GPR37L1O60883 481 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 FURINP09958 794 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 TNFSF8P32971 234 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 OR2B6P58173 313 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 MPEG1Q2M385 716 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 GAREM2Q75VX8 874 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.96□□□□□ -0.01
NUP88-207ENST00000573584 TAGAPQ8N103 731 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 MRPS31Q92665 395 aaKnown RBP14.96□□□□□ -0.01
NUP88-207ENST00000573584 REPS1Q96D71 796 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 SCLYQ96I15 445 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 LMLNQ96KR4 655 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 IL4I1Q96RQ9 567 aa14.96□□□□□ -0.01
NUP88-207ENST00000573584 WRAP53Q9BUR4 548 aaKnown RBP14.96□□□□□ -0.01
NUP88-207ENST00000573584 WBP11Q9Y2W2 641 aaKnown RBP14.96□□□□□ -0.01
NUP88-207ENST00000573584 FAM47E-STBD1D6RA91 191 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 RGS5O15539 181 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 TGFB1P01137 390 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 ZNF30P17039 623 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 RHCEP18577 417 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 TIE1P35590 1138 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 TM4SF4P48230 202 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 STARD3Q14849 445 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 BCL7AQ4VC05 210 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 IER5LQ5T953 404 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 UTS2BQ765I0 119 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 TCEAL8Q8IYN2 117 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 PSD4Q8NDX1 1056 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 FLCNQ8NFG4 579 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 NMNAT1Q9HAN9 279 aaPredicted RBP14.96□□□□□ -0.02
NUP88-207ENST00000573584 TAS2R9Q9NYW1 312 aa14.96□□□□□ -0.02
NUP88-207ENST00000573584 A0A075B6Q4 140 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 NPC1O15118 1278 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 IFNW1P05000 195 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 CD72P21854 359 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 PDHA2P29803 388 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 SOAT1P35610 550 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 LRRC26Q2I0M4 334 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 KLHDC8AQ8IYD2 350 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 RASGEF1AQ8N9B8 481 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 FAM46DQ8NEK8 389 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 ST13P5Q8NFI4 369 aaPredicted RBP14.95□□□□□ -0.02
NUP88-207ENST00000573584 WDR48Q8TAF3 677 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 FOPNLQ96NB1 174 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 TAPBPLQ9BX59 468 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 ASPNQ9BXN1 380 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 OR51B5Q9H339 312 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 DYRK4Q9NR20 520 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 ANGPT4Q9Y264 503 aa14.95□□□□□ -0.02
NUP88-207ENST00000573584 FAM227AF5H4B4 570 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms