RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 BPGMP07738 259 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 MMP11P24347 488 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 TSFMP43897 325 aaKnown RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SERPINB4P48594 390 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SLC18A1P54219 525 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 MTTPP55157 894 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 RPS13P62277 151 aaKnown RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 BTN3A2P78410 334 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF33BQ06732 778 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 CUL3Q13618 768 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 RCN2Q14257 317 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 AP5B1Q2VPB7 878 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 LACTB2Q53H82 288 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 DEPDC1Q5TB30 811 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 ADNP2Q6IQ32 1131 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 ABHD17CQ6PCB6 329 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SHISA6Q6ZSJ9 500 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 PDSS2Q86YH6 399 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 NUDCD3Q8IVD9 361 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 CDYL2Q8N8U2 506 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 PPP1R14CQ8TAE6 165 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 METTL6Q8TCB7 284 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 ADAMTS18Q8TE60 1221 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 AGAP11Q8TF27 550 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SELENOMQ8WWX9 145 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 RGMAQ96B86 450 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 OR1F2PQ96R84 312 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 F2RL3Q96RI0 385 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SERINC2Q96SA4 455 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 GATA5Q9BWX5 397 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 NPLQ9BXD5 320 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 SOX17Q9H6I2 414 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 BRF2Q9HAW0 419 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF71Q9NQZ8 489 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-213ENST00000573577 NMRK1Q9NWW6 199 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 P4HTMQ9NXG6 502 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 HCN3Q9P1Z3 774 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 TP53TG5Q9Y2B4 290 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 COL6A6A6NMZ7 2263 aa12.79□□□□□ -0.36
RPAIN-213ENST00000573577 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 SPTA1P02549 2419 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 A0A1B0GTL3 188 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 TMEM120BA0PK00 339 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF860A6NHJ4 632 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 PCDH17O14917 1159 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 ULK1O75385 1050 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 SEMA3DO95025 777 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 TBX6O95947 436 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-213ENST00000573577 CYC1P08574 325 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 NEFHP12036 1026 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 HSD3B1P14060 373 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 JAK1P23458 1154 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 HSD3B2P26439 372 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 XCR1P46094 333 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 CCL11P51671 97 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 NEK2P51955 445 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 MAT1AQ00266 395 aaKnown RBP12.78□□□□□ -0.36
RPAIN-213ENST00000573577 KLC1Q07866 573 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 GALNT1Q10472 559 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-213ENST00000573577 VWA2Q5GFL6 755 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 HHATQ5VTY9 493 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF605Q86T29 641 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 MTFMTQ96DP5 389 aaKnown RBP12.78□□□□□ -0.36
RPAIN-213ENST00000573577 ATP6V1G3Q96LB4 118 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 FER1L6-AS2Q96M78 137 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 CRB3Q9BUF7 120 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 MECRQ9BV79 373 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 AICDAQ9GZX7 198 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 OR51B5Q9H339 312 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 SEMA3GQ9NS98 782 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF225Q9UK10 706 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 PCDHGA9Q9Y5G4 932 aaKnown RBP12.78□□□□□ -0.36
RPAIN-213ENST00000573577 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
RPAIN-213ENST00000573577 A0A0G2JN53 185 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-213ENST00000573577 K7EM74 188 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 MANBAO00462 879 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 CHST10O43529 356 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 SH3BGRLO75368 114 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 CEACAM4O75871 244 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 BMP10O95393 424 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 PDYNP01213 254 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 HEXBP07686 556 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 DHRS4L1P0CG22 281 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 RNH1P13489 461 aaKnown RBP12.77□□□□□ -0.37
RPAIN-213ENST00000573577 NR1D1P20393 614 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 SSR2P43308 183 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 SYT16Q17RD7 645 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 SGO1Q5FBB7 561 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 DCAF10Q5QP82 559 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 MFSD4BQ5TF39 518 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 OR4C11Q6IEV9 310 aa12.77□□□□□ -0.37
RPAIN-213ENST00000573577 PTRH1Q86Y79 214 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms