RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SOX14O95416 240 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 GSTM1P09488 218 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 SELPP16109 830 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 PTX3P26022 381 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-205ENST00000571272 XCR1P46094 333 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 FRMPD2BQ6IN97 320 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 Q6ZVL8 140 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 CAMKMTQ7Z624 323 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 UBQLNLQ8IYU4 475 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 OR52N2Q8NGI0 321 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TRMT2BQ96GJ1 504 aaKnown RBP16.71■□□□□ 0.27
SCARF1-205ENST00000571272 OPALINQ96PE5 141 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TMEM175Q9BSA9 504 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 BARHL1Q9BZE3 327 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 NMNAT1Q9HAN9 279 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-205ENST00000571272 BRF2Q9HAW0 419 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 THSD1Q9NS62 852 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 SNTG1Q9NSN8 517 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 CFAP97Q9P2B7 532 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 BOLA1Q9Y3E2 137 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 BACE2Q9Y5Z0 518 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 ALPK3Q96L96 1907 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TRBC2A0A5B9 178 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TFECO14948 347 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-205ENST00000571272 SLITRK5O94991 958 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 LATS1O95835 1130 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TGFB1P01137 390 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 CRISP1P54107 249 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 CCL23P55773 120 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 STARD3Q14849 445 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 DUSP7Q16829 419 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 SYTL3Q4VX76 610 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 SPIN4Q56A73 249 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 THOC7Q6I9Y2 204 aaKnown RBP16.71■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF544Q6NX49 715 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 C22orf39Q6P5X5 142 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 C19orf48Q6RUI8 117 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 GEMIN6Q8WXD5 167 aaKnown RBP16.71■□□□□ 0.27
SCARF1-205ENST00000571272 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TP53INP1Q96A56 240 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 REEP4Q9H6H4 257 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 HHATLQ9HCP6 504 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 STARD7Q9NQZ5 370 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 DNAJC27Q9NZQ0 273 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 PCM1Q15154 2024 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 TSPAN6O43657 245 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 CBLP22681 906 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 IMPA1P29218 277 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 TAB1Q15750 504 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 MPEG1Q2M385 716 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 SLC34A3Q8N130 599 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 CCDC32Q9BV29 185 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 OR51B5Q9H339 312 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 TAS2R9Q9NYW1 312 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 CRNNQ9UBG3 495 aaPredicted RBP16.71■□□□□ 0.26
SCARF1-205ENST00000571272 FTSJ1Q9UET6 329 aa16.71■□□□□ 0.26
SCARF1-205ENST00000571272 ZAR1LA6NP61 321 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 PBLDP30039 288 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ETV3P41162 512 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 CTSCP53634 463 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 MRPS15P82914 257 aaKnown RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 DAB2P98082 770 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 MXD1Q05195 221 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF33BQ06732 778 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 DMPKQ09013 629 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 C2orf80Q0P641 193 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 BAK1Q16611 211 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ARMC4Q5T2S8 1044 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 Q6ZVU0 165 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ARMCX6Q7L4S7 300 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 COMMD6Q7Z4G1 85 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 HSD11B1LQ7Z5J1 315 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 BCDIN3DQ7Z5W3 292 aaKnown RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 SLC44A2Q8IWA5 706 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 LAX1Q8IWV1 398 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ST13P5Q8NFI4 369 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 WDR48Q8TAF3 677 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TMEM159Q96B96 161 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TRMT61AQ96FX7 289 aaKnown RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 MRPL9Q9BYD2 267 aaKnown RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 FAM83DQ9H4H8 585 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 RERGLQ9H628 205 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TIGARQ9NQ88 270 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 DYRK4Q9NR20 520 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 RGS13O14921 159 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 KPNA5O15131 536 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 SLCO2B1O94956 709 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 HSD3B1P14060 373 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 CD72P21854 359 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 HSD3B2P26439 372 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TIE1P35590 1138 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 RACK1P63244 317 aaKnown RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 MEF2AQ02078 507 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TEKQ02763 1124 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF763Q0D2J5 394 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 MADCAM1Q13477 382 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 KCNC3Q14003 757 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 WDR53Q7Z5U6 358 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms