RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 AGXTP21549 392 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 CASP2P42575 452 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 RAB8AP61006 207 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 TRAF3Q13114 568 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 MPP2Q14168 576 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 NCF4Q15080 339 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 TBCCQ15814 346 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 MUM1Q2TAK8 710 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 TTMPQ5BVD1 217 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 HHATQ5VTY9 493 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 LIPJQ5W064 366 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 RHBDD2Q6NTF9 364 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 METTL2BQ6P1Q9 378 aaKnown RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 GPRIN3Q6ZVF9 776 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 PRSS41Q7RTY9 318 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 MRGPREQ86SM8 312 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 NUDCD3Q8IVD9 361 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 CDYL2Q8N8U2 506 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 TRPV3Q8NET8 790 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 UBE2E3Q969T4 207 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 TLCD1Q96CP7 247 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 TM4SF19Q96DZ7 209 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 WDR34Q96EX3 536 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 MMABQ96EY8 250 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 ATP6V1G3Q96LB4 118 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 MTERF1Q99551 399 aaKnown RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 GATA5Q9BWX5 397 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 ACBD3Q9H3P7 528 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 SSU72Q9NP77 194 aaKnown RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 MID1IP1Q9NPA3 183 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 ZNF446Q9NWS9 450 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 NKIRAS1Q9NYS0 192 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 GPN3Q9UHW5 284 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-205ENST00000571028 NTNG1Q9Y2I2 539 aa12.59□□□□□ -0.39
CCDC40-205ENST00000571028 ITPR3Q14573 2671 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 SETD2Q9BYW2 2564 aaPredicted RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 FITM1A5D6W6 292 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF860A6NHJ4 632 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 SAP18O00422 153 aaKnown RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 DSCR3O14972 297 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 TM9SF1O15321 606 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 PRPF4O43172 522 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 CRCPO75575 148 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 MLYCDO95822 493 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 BPGMP07738 259 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF888P0CJ79 500 aaPredicted RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 EDN3P14138 238 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 COX6B1P14854 86 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 RORAP35398 523 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 AHRP35869 848 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 SERPINB4P48594 390 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 DNAJB13P59910 316 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 ASPHQ12797 758 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 NKAIN1Q4KMZ8 207 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 LETMD1Q6P1Q0 360 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 FAM198BQ6UWH4 519 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 Q6ZS92 163 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 VN1R5Q7Z5H4 357 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 CUZD1Q86UP6 607 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 PRSS58Q8IYP2 241 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 L3MBTL4Q8NA19 623 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 TTLQ8NG68 377 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 OR7G3Q8NG95 312 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 OR9A4Q8NGU2 314 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 NT5CQ8TCD5 201 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 CREB3L4Q8TEY5 395 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 SREK1Q8WXA9 508 aaKnown RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 GBP5Q96PP8 586 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 F2RL3Q96RI0 385 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 WDR77Q9BQA1 342 aaPredicted RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 C17orf62Q9BQA9 187 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 NTMT1Q9BV86 223 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 SARGQ9BW04 601 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 C1QTNF3Q9BXJ4 246 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 NT5DC2Q9H857 520 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF304Q9HCX3 659 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 IFT80Q9P2H3 777 aaPredicted RBP12.58□□□□□ -0.4
CCDC40-205ENST00000571028 FIS1Q9Y3D6 152 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 PCDHGA11Q9Y5H2 935 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 CELSR1Q9NYQ6 3014 aa12.58□□□□□ -0.4
CCDC40-205ENST00000571028 SGK494L7N484 410 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 FOXS1O43638 330 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 ZWINTO95229 277 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 SNRPB2P08579 225 aaKnown RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 FBLP22087 321 aaKnown RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 HMOX2P30519 316 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 ETV4P43268 484 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 AVPR1BP47901 424 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 PLA2G16P53816 162 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 FOXL2P58012 376 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 STXBP1P61764 594 aaKnown RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 BTN3A2P78410 334 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 PHEXP78562 749 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 MAT1AQ00266 395 aaKnown RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 LCP2Q13094 533 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms