RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SH2D5Q6ZV89 423 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 ZGRF1Q86YA3 2104 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 SIRT6Q8N6T7 355 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 AENQ8WTP8 325 aaKnown RBP12.6□□□□□ -0.39
RPAIN-207ENST00000570883 PNPLA2Q96AD5 504 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 SERINC2Q96SA4 455 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 CSF3RQ99062 836 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 MTERF1Q99551 399 aaKnown RBP12.6□□□□□ -0.39
RPAIN-207ENST00000570883 CCDC77Q9BR77 488 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 NPLQ9BXD5 320 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-207ENST00000570883 C1QTNF3Q9BXJ4 246 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 OR51B5Q9H339 312 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 NECTIN3Q9NQS3 549 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 C19orf25Q9UFG5 118 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-207ENST00000570883 EMCNQ9ULC0 261 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 TSC22D4Q9Y3Q8 395 aa12.6□□□□□ -0.39
RPAIN-207ENST00000570883 LRRK2Q5S007 2527 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 CROCCQ5TZA2 2017 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 USP9XQ93008 2570 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 A0A088AWK7 358 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 TCRBV16S1A1N1A0A5B0 115 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 SMIM23A6NLE4 172 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 H0YIV9 168 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PSMD12O00232 456 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 SAP18O00422 153 aaKnown RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 CYR61O00622 381 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PPP6CO00743 305 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 B3GALT2O43825 422 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 DLX3O60479 287 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PRMT3O60678 531 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 SCELO95171 688 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 ZNF10P21506 573 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 ATP5A1P25705 553 aaKnown RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 LIM2P55344 173 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 RAB38P57729 211 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 FOXK1P85037 733 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 MFAP5Q13361 173 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 CPSF6Q16630 551 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 TMEM35AQ53FP2 167 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 IRAK1BP1Q5VVH5 260 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 B3GNTL1Q67FW5 361 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PLAG1Q6DJT9 500 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PAPD4Q6PIY7 484 aaKnown RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 LINC00696Q6ZRV3 163 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 TDRPQ86YL5 185 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 SCUBE1Q8IWY4 988 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 OR2W6PQ8NHA6 318 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 WDR20Q8TBZ3 569 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 ZNF483Q8TF39 744 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 CMTM7Q96FZ5 175 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PTCHD1Q96NR3 888 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 KCNC2Q96PR1 638 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 TMEM237Q96Q45 408 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 SORBS1Q9BX66 1292 aaKnown RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 ZNF717Q9BY31 904 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 COPS7BQ9H9Q2 264 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 SEMA4BQ9NPR2 832 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PRDM9Q9NQV7 894 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 KCMF1Q9P0J7 381 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PTGFRNQ9P2B2 879 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 DAPP1Q9UN19 280 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PLAAQ9Y263 795 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 B3GNT3Q9Y2A9 372 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PCDHGA11Q9Y5H2 935 aa12.59□□□□□ -0.39
RPAIN-207ENST00000570883 PLPP1O14494 284 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 CLDN9O95484 217 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 ETHE1O95571 254 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 GSTA1P08263 222 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 TSPAN8P19075 237 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 HIST1H1TP22492 207 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-207ENST00000570883 NEK2P51955 445 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 CCNG1P51959 295 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 CDH13P55290 713 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 OR4D2P58180 307 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 RPS13P62277 151 aaKnown RBP12.58□□□□□ -0.4
RPAIN-207ENST00000570883 TGM3Q08188 693 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 RASA2Q15283 850 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 IGFBP7Q16270 282 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 BTBD16Q32M84 506 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 CRB2Q5IJ48 1285 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 DEPDC1Q5TB30 811 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 LETMD1Q6P1Q0 360 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 WDR93Q6P2C0 686 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 Q6ZS92 163 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 CUZD1Q86UP6 607 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 MAPKAP1Q9BPZ7 522 aa12.58□□□□□ -0.4
RPAIN-207ENST00000570883 TBCDQ9BTW9 1192 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms