RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 TEX37Q96LM6 180 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 NDC1Q9BTX1 674 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 ENAMQ9NRM1 1142 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 CCDC167Q9P0B6 97 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 FBXW2Q9UKT8 454 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 A0A0A6YYC8 382 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM234BA2RU67 622 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 I3L1I5 382 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 SGK494L7N484 410 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 PRMT3O60678 531 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 RDH16O75452 317 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 PRPS1L1P21108 318 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 IL12AP29459 219 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 GSTM5P46439 218 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 AVPR1BP47901 424 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 NOVA1P51513 510 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 KLC1Q07866 573 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 SLAMF1Q13291 335 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 ISXQ2M1V0 245 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM214AQ32MH5 1076 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 YOD1Q5VVQ6 348 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 MRM1Q6IN84 353 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 SNX32Q86XE0 403 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 DTWD1Q8N5C7 304 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 METTL27Q8N6F8 245 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 POU5F2Q8N7G0 328 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 GLB1L3Q8NCI6 653 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 PROKR1Q8TCW9 393 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 STARD8Q92502 1023 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 CMKLR1Q99788 373 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 ARL8BQ9NVJ2 186 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 NDOR1Q9UHB4 597 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 CDV3Q9UKY7 258 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 SRPK3Q9UPE1 567 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 LOXL2Q9Y4K0 774 aa14.61□□□□□ -0.07
HERPUD1-219ENST00000570273 SLC30A4O14863 429 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 SCAMP2O15127 329 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 ZNF749O43361 778 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 GUCY1B2O75343 617 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 CBX6O95503 412 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 COX4I1P13073 169 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 COX7A2P14406 83 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 PRDX6P30041 224 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 POLR2JP52435 117 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 ARSFP54793 590 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 HNRNPH2P55795 449 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 KCNK10P57789 538 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 OLR1P78380 273 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 C2orf80Q0P641 193 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM53BQ14153 422 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 PRAMEF17Q5VTA0 474 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM71E1Q6IPT2 247 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 NIPAL1Q6NVV3 410 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 CCDC121Q6ZUS5 278 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 TTLL10Q6ZVT0 673 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 PPP1R3BQ86XI6 285 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 TMEM126BQ8IUX1 230 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 FUNDC1Q8IVP5 155 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 COL27A1Q8IZC6 1860 aaPredicted RBP14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 TM4SF18Q96CE8 201 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 MAPKAP1Q9BPZ7 522 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 FAIM2Q9BWQ8 316 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 SLC7A5P2Q9GIP4 190 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 SPTBN4Q9H254 2564 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 CLMPQ9H6B4 373 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 APMAPQ9HDC9 416 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 TMEM45AQ9NWC5 275 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 TEX10Q9NXF1 929 aaPredicted RBP14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 TAGLN3Q9UI15 199 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 PHF11Q9UIL8 331 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 MAPRE3Q9UPY8 281 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 CLCA2Q9UQC9 943 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 WBP11Q9Y2W2 641 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 ASB4Q9Y574 426 aa14.6□□□□□ -0.07
HERPUD1-219ENST00000570273 POLR1CO15160 346 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 FOXS1O43638 330 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 DKK1O94907 266 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 NSA2O95478 260 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 SNRPB2P08579 225 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 CCL4P13236 92 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 CD1EP15812 388 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 RPL3P39023 403 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 GCGRP47871 477 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 ALDH9A1P49189 494 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 C21orf58P58505 322 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 MC2RQ01718 297 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 RUNX2Q13950 521 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 CYLC2Q14093 348 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 RCAN2Q14206 197 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 ZSCAN26Q16670 478 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 TIGD2Q4W5G0 525 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 BLOC1S3Q6QNY0 202 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 GPR180Q86V85 440 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 RIMKLAQ8IXN7 391 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 MMP21Q8N119 569 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 BMPERQ8N8U9 685 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 OR5T3Q8NGG3 340 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.59□□□□□ -0.076e-56■■■■□ 21.3
HERPUD1-219ENST00000570273 NUDT8Q8WV74 236 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 CMTM5Q96DZ9 223 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms