RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 UQCRC1P31930 480 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SLC1A2P43004 574 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 MAGEA5P43359 124 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SCTRP47872 440 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 RGS4P49798 205 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 GPR143P51810 404 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 RAB8AP61006 207 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SARNPP82979 210 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 KEAP1Q14145 624 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 CCNG2Q16589 344 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SKOR2Q2VWA4 1001 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 BBS9Q3SYG4 887 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 RIPPLY2Q5TAB7 128 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 UGT3A1Q6NUS8 523 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 DRICH1Q6PGQ1 229 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 IL20RBQ6UXL0 311 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 C16orf47Q6ZP98 133 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 Q71RC1 249 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 GSTA5Q7RTV2 222 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 TXLNBQ8N3L3 684 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 TMEM251Q8N6I4 163 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 FAM222BQ8WU58 562 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SLCO2A1Q92959 643 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF669Q96BR6 464 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SARAFQ96BY9 339 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 PYCR2Q96C36 320 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 LRRC46Q96FV0 321 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SNF8Q96H20 258 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 HIST1H2AHQ96KK5 128 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 HIST1H2AJQ99878 128 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SMR3AQ99954 134 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 FAM173AQ9BQD7 235 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 AARSD1Q9BTE6 412 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 H2AFJQ9BTM1 129 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 IL1RL2Q9HB29 575 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 MYOTQ9UBF9 498 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 CBLCQ9ULV8 474 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 CAPN6Q9Y6Q1 641 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 CSPG4Q6UVK1 2322 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 HRNRQ86YZ3 2850 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 TCRBV7S3A2A0A539 114 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 PABPN1LA6NDY0 278 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 G3V3Y1 287 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 SYT5O00445 386 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 PRKNO60260 465 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 ATE1O95260 518 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 INHBBP09529 407 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 CNR1P21554 472 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 SOX3P41225 446 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 HNF4AP41235 474 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 MAN2A2P49641 1150 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 DHX9Q08211 1270 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 CSHL1Q14406 222 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 PHKG1Q16816 387 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 HYAL4Q2M3T9 481 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 XKR6Q5GH73 641 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 CATSPEREQ5SY80 951 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 FBXW10Q5XX13 1052 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 DUPD1Q68J44 220 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 RTL4Q6ZR62 310 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 SCUBE1Q8IWY4 988 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 LMNTD2Q8IXW0 634 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 CA13Q8N1Q1 262 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 MYO1HQ8N1T3 1032 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 GOLM1Q8NBJ4 401 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 TRPV3Q8NET8 790 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 OR56A3Q8NH54 315 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 CALML6Q8TD86 181 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 EEF1AKMT1Q8WVE0 214 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 SLC5A11Q8WWX8 675 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 OR4K3Q96R72 315 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 RASL10BQ96S79 203 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 SPNS1Q9H2V7 528 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 LDAHQ9H6V9 325 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 LIN28AQ9H9Z2 209 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 ADAP2Q9NPF8 381 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 ALKBH4Q9NXW9 302 aa10.94□□□□□ -0.66
GTF3C1-209ENST00000568569 ZCWPW2A0A1B0GU75 182 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 ATP6AP2A0A1C7CYW4 349 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 MAGEB16A2A368 324 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SYNDIG1LA6NDD5 238 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 HSPB2A8KAH6 182 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 CLDN4O14493 209 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 HCN1O60741 890 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 ATP6AP2O75787 350 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SMIM10L1P0DMW3 83 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 PPP2R1BP30154 601 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 HOXC12P31275 282 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 ASCL1P50553 236 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 AP1S2P56377 157 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 HSD17B7P56937 341 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 REEP5Q00765 189 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SLC13A2Q13183 592 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SLC10A1Q14973 349 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 DAZAP2Q15038 168 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SIX1Q15475 284 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 HSPB2Q16082 182 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 CLEC9AQ6UXN8 241 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 FAM47EQ6ZV65 393 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 GPATCH11Q8N954 259 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms