RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 ASIC5Q9NY37 505 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 ARMCX1Q9P291 453 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 EPHA6Q9UF33 1036 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 GIMAP2Q9UG22 337 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 TUBD1Q9UJT1 453 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 G3BP2Q9UN86 482 aaKnown RBP8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 EIF3LQ9Y262 564 aaKnown RBP8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 KLHL20Q9Y2M5 609 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 AP1M2Q9Y6Q5 423 aa8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 MN1Q10571 1320 aaPredicted RBP8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
KLHDC4-220ENST00000568338 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 UTP20O75691 2785 aaKnown RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 RELNP78509 3460 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 EME2A4GXA9 379 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 ERICH4A6NGS2 130 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 TMX2-CTNND1H3BSU7 103 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 NDUFS4O43181 175 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 NRP2O60462 931 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 MYO1DO94832 1006 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 UBOX5O94941 541 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 SEMA3DO95025 777 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 ETHE1O95571 254 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 TGFB1P01137 390 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 SLC35G6P0C7Q6 338 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PVRP15151 417 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 RAP1GDS1P52306 607 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PDX1P52945 283 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 OR1D5P58170 312 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PPP1CAP62136 330 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 CUL3Q13618 768 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 KRT72Q14CN4 511 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 MAPRE2Q15555 327 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PDCD4Q53EL6 469 aaKnown RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 TMEM35AQ53FP2 167 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PERM1Q5SV97 790 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 KHDRBS2Q5VWX1 349 aaKnown RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 FCRL6Q6DN72 434 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 FAM92BQ6ZTR7 304 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 VN1R5Q7Z5H4 357 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 YTHDF3Q7Z739 585 aaKnown RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PLXDC1Q8IUK5 500 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PLD3Q8IV08 490 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 MIER2Q8N344 545 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 ZNF655Q8N720 491 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 Q8N9G6 341 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 C9orf43Q8TAL5 461 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 RERGQ96A58 199 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 APIPQ96GX9 242 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 FCRL1Q96LA6 429 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 TGM7Q96PF1 710 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 MAP3K3Q99759 626 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 CCDC3Q9BQI4 270 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 C1orf50Q9BV19 199 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 MS4A8Q9BY19 250 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 BRINP2Q9C0B6 783 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 SDR39U1Q9NRG7 319 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 AHSPQ9NZD4 102 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 PISDQ9UG56 409 aa8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 RUVBL1Q9Y265 456 aaKnown RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 POLR3HQ9Y535 204 aaPredicted RBP8.17□□□□□ -1.1
KLHDC4-220ENST00000568338 CAPN14A8MX76 684 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 PSMD12O00232 456 aaPredicted RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 NVLO15381 856 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 B4GAT1O43505 415 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 LCMT2O60294 686 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 HNRNPCL1O60812 293 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 CTSVO60911 334 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 SH3BGRLO75368 114 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 RASSF9O75901 435 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 ZBTB11O95625 1053 aaPredicted RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 C9P02748 559 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 SERPIND1P05546 499 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 PRPS2P11908 318 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 ST6GAL1P15907 406 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 ELAVL4P26378 380 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 PIK3R1P27986 724 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 PRDX6P30041 224 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 CSF2RBP32927 897 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 ARFIP1P53367 373 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 DIO3P55073 304 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 GFERP55789 205 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 STXBP1P61764 594 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 RGS1Q08116 209 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 TBL3Q12788 808 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 KLF10Q13118 480 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 HERC3Q15034 1050 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 KIAA0040Q15053 153 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 ZIC1Q15915 447 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 CLPPQ16740 277 aaPredicted RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 AMZ1Q400G9 498 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 RFTN2Q52LD8 501 aaPredicted RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 ZC3H12BQ5HYM0 836 aaKnown RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 DEPDC1Q5TB30 811 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 IL23RQ5VWK5 629 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 NKAIN2Q5VXU1 208 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 NOXRED1Q6NXP6 359 aa8.16□□□□□ -1.1
KLHDC4-220ENST00000568338 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms