RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 OSBPL10Q9BXB5 764 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 YTHDF1Q9BYJ9 559 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SLC2A11Q9BYW1 496 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TINAGL1Q9GZM7 467 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 COPS7BQ9H9Q2 264 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 AIG1Q9NVV5 245 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 AFF4Q9UHB7 1163 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 STOML2Q9UJZ1 356 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 APPL1Q9UKG1 709 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 AGO1Q9UL18 857 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CDH7Q9ULB5 785 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SLC8A2Q9UPR5 921 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CRYL1Q9Y2S2 319 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PRG3Q9Y2Y8 225 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PKP3Q9Y446 797 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SNX13Q9Y5W8 968 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 IGSF10Q6WRI0 2623 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 GREB1Q4ZG55 1949 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 DOCK8Q8NF50 2099 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 A0A087WXM4 84 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF840PA6NDX5 716 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ANKRD66B4E2M5 251 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 E5RI56 91 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 UBXN8O00124 270 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 BTN3A1O00481 513 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 NR5A2O00482 541 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 FBP2O00757 339 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 UBFD1O14562 309 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PRMT5O14744 637 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PIP5K1BO14986 540 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RAD51BO15315 384 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 AKAP10O43572 662 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SOCS5O75159 536 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SLC22A3O75751 556 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RNASEH2AO75792 299 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 EPN2O95208 641 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SPTA1P02549 2419 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 URODP06132 367 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CNPP09543 421 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SMIM18P0DKX4 95 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 HGFP14210 728 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PPP3CBP16298 524 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ITGALP20701 1170 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 FBLP22087 321 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 HTR1EP28566 365 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 EEF1DP29692 281 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 HMGCLP35914 325 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 DPP6P42658 865 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CCR10P46092 362 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CXCL12P48061 93 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CSNK1DP48730 415 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SLC7A2P52569 658 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 HNRNPFP52597 415 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PLK1P53350 603 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 NME5P56597 212 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PEX6Q13608 980 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 GALNT3Q14435 633 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 VEPH1Q14D04 833 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PTPRRQ15256 657 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 TAF12Q16514 161 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 GPR33Q49SQ1 333 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CCDC157Q569K6 752 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF789Q5FWF6 425 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 XKR7Q5GH72 579 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 C6orf10Q5SRN2 563 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 C2orf16Q68DN1 1984 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 NADSYN1Q6IA69 706 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF549Q6P9A3 640 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 TMEM207Q6UWW9 146 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 TPRG1Q6ZUI0 275 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 GPRIN3Q6ZVF9 776 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 FRA10AC1Q70Z53 315 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RTL10Q7L3V2 364 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 GET4Q7L5D6 327 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 KDELC2Q7Z4H8 507 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PPP1R32Q7Z5V6 425 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PPP1R3BQ86XI6 285 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 GPSM1Q86YR5 675 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 DDIASQ8IXT1 998 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 LGI2Q8N0V4 545 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 TCAIMQ8N3R3 496 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RYBPQ8N488 228 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SPATA6LQ8N4H0 392 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SPEM1Q8N4L4 309 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PCDH20Q8N6Y1 951 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 DCAF4L2Q8NA75 395 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 HJURPQ8NCD3 748 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 LSM14AQ8ND56 463 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PAPD5Q8NDF8 572 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PSD4Q8NDX1 1056 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 TRPV3Q8NET8 790 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 OR8J3Q8NGG0 315 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 OR52E4Q8NGH9 312 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 OR52K2Q8NGK3 314 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ADAMTS16Q8TE57 1224 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 LRRC58Q96CX6 371 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 MTFMTQ96DP5 389 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RMND5BQ96G75 393 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SLC35A4Q96G79 324 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms