RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 PDGFAP04085 211 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 ICAM2P13598 275 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 HIST1H1TP22492 207 aaPredicted RBP12.53□□□□□ -0.4
NEIL1-213ENST00000567393 CERS1P27544 350 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 SSR2P43308 183 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 EFNA3P52797 238 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 CDH13P55290 713 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 RPS13P62277 151 aaKnown RBP12.53□□□□□ -0.4
NEIL1-213ENST00000567393 CLCQ05315 142 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 KLRB1Q12918 225 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 IFT88Q13099 833 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 CUL3Q13618 768 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 RUNX2Q13950 521 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 PCOLCEQ15113 449 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 NSDHLQ15738 373 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 UNC50Q53HI1 259 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 FRG2Q64ET8 278 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
NEIL1-213ENST00000567393 RIPOR1Q6ZS17 1223 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 LANCL3Q6ZV70 420 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 UBE3DQ7Z6J8 389 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 ANKRD37Q7Z713 158 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 PARP9Q8IXQ6 854 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 SHISA5Q8N114 240 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 C4orf33Q8N1A6 199 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 ARMC2Q8NEN0 867 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 MYRIPQ8NFW9 859 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 OR4F6Q8NGB9 312 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 WDR20Q8TBZ3 569 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 RGMAQ96B86 450 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 APOPT1Q96IL0 206 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 FRG2BQ96QU4 278 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 ZNF382Q96SR6 550 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 SERPINI1Q99574 410 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 MESP1Q9BRJ9 268 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 OR51B5Q9H339 312 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 LYRM4Q9HD34 91 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 PRDM9Q9NQV7 894 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 PRDM7Q9NQW5 492 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 TRPS1Q9UHF7 1281 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 ANAPC2Q9UJX6 822 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 DAPP1Q9UN19 280 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 MMACHCQ9Y4U1 282 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 SPACA6W5XKT8 324 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 PCSK5Q92824 1860 aa12.53□□□□□ -0.4
NEIL1-213ENST00000567393 LOC400499M0QZD8 3231 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SYNDIG1LA6NDD5 238 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 G3V2L1 256 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 MASP2O00187 686 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 DPM1O60762 260 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 ERLIN1O75477 346 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SEMA3DO95025 777 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SERPINA7P05543 415 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 NR1D1P20393 614 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 ATP5A1P25705 553 aaKnown RBP12.52□□□□□ -0.41
NEIL1-213ENST00000567393 LIM2P55344 173 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 HSD17B7P56937 341 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 LCP2Q13094 533 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 RAPSNQ13702 412 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 AGAP7PQ5VUJ5 663 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.41
NEIL1-213ENST00000567393 LETMD1Q6P1Q0 360 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 RPS27LQ71UM5 84 aaKnown RBP12.52□□□□□ -0.41
NEIL1-213ENST00000567393 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SRRM1Q8IYB3 904 aaKnown RBP12.52□□□□□ -0.41
NEIL1-213ENST00000567393 ACOT4Q8N9L9 421 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 CCDC63Q8NA47 563 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 TEX19Q8NA77 164 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 TSLPQ969D9 159 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 THOC3Q96J01 351 aaKnown RBP12.52□□□□□ -0.41
NEIL1-213ENST00000567393 PTCHD1Q96NR3 888 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 AGAP4Q96P64 663 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 LPAR4Q99677 370 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SLC29A3Q9BZD2 475 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 SNX6Q9UNH7 406 aa12.52□□□□□ -0.41
NEIL1-213ENST00000567393 MDC1Q14676 2089 aaKnown RBP12.51□□□□□ -0.41
NEIL1-213ENST00000567393 ANKRD12Q6UB98 2062 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 IGKV3D-11A0A0A0MRZ8 115 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 BLACEA4D250 179 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 OR2W5A6NFC9 320 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 FAM227AF5H4B4 570 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 H3BQF6 201 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 SAP18O00422 153 aaKnown RBP12.51□□□□□ -0.41
NEIL1-213ENST00000567393 RTCAO00442 366 aaKnown RBP12.51□□□□□ -0.41
NEIL1-213ENST00000567393 SH3BGRLO75368 114 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 SEC24DO94855 1032 aaPredicted RBP12.51□□□□□ -0.41
NEIL1-213ENST00000567393 ENO1P06733 434 aaKnown RBP12.51□□□□□ -0.41
NEIL1-213ENST00000567393 PRR35P0CG20 571 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 CPA3P15088 417 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 TSPAN8P19075 237 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 NEK2P51955 445 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 PKNOX1P55347 436 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 OR4D2P58180 307 aa12.51□□□□□ -0.41
NEIL1-213ENST00000567393 DNAJB13P59910 316 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms