RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RAB17Q9H0T7 212 aa14.03□□□□□ -0.16
SPG7-210ENST00000564409 RHBGQ9H310 441 aa14.03□□□□□ -0.16
SPG7-210ENST00000564409 NECTIN3Q9NQS3 549 aa14.03□□□□□ -0.16
SPG7-210ENST00000564409 ANKRD10Q9NXR5 420 aa14.03□□□□□ -0.16
SPG7-210ENST00000564409 CD274Q9NZQ7 290 aa14.03□□□□□ -0.16
SPG7-210ENST00000564409 PTBP2Q9UKA9 531 aaKnown RBP14.03□□□□□ -0.16
SPG7-210ENST00000564409 KLF13Q9Y2Y9 288 aaPredicted RBP14.03□□□□□ -0.16
SPG7-210ENST00000564409 UTP11Q9Y3A2 253 aaKnown RBP14.03□□□□□ -0.16
SPG7-210ENST00000564409 CCDC189A1A4V9 331 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 CXorf49A8MYA2 514 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 PRSS44E7EML9 344 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 TAPBPO15533 448 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 ASNA1O43681 348 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 S100BP04271 92 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 ESRRAP11474 423 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 CD1DP15813 335 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 SERPINB1P30740 379 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 HNRNPH1P31943 449 aaKnown RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 CASP2P42575 452 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 SMSP52788 366 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 MTTPP55157 894 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 NAB1Q13506 487 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 RUNX2Q13950 521 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 NAA30Q147X3 362 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 MAPKAPK3Q16644 382 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 CAPN12Q6ZSI9 719 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 MRGPRGQ86SM5 289 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 SPPL2CQ8IUH8 684 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 GHDCQ8N2G8 530 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 TMEM132CQ8N3T6 1108 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 KIF2BQ8N4N8 673 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 APCDD1LQ8NCL9 501 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 STAG3L4Q8TBR4 150 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 UBE2E3Q969T4 207 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 QRFPRQ96P65 431 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 CCDC77Q9BR77 488 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 AICDAQ9GZX7 198 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 DPH5Q9H2P9 285 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 COPS7BQ9H9Q2 264 aaPredicted RBP14.02□□□□□ -0.17
SPG7-210ENST00000564409 ADAP2Q9NPF8 381 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 PRTFDC1Q9NRG1 225 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 MYO9AB2RTY4 2548 aa14.02□□□□□ -0.17
SPG7-210ENST00000564409 C4orf51C9J302 202 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 NPIPA5E9PKD4 350 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 KLRC4-KLRK1H3BQV0 150 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 PHGDHO43175 533 aaKnown RBP14.01□□□□□ -0.17
SPG7-210ENST00000564409 RAD51CO43502 376 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 MYO1DO94832 1006 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 ZNF24P17028 368 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 TFEBP19484 476 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 CRABP2P29373 138 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 STX2P32856 288 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 KCNC1P48547 511 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 HSPA7P48741 367 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 PCDH1Q08174 1060 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 SLC13A2Q13183 592 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 E2F2Q14209 437 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 ELAVL1Q15717 326 aaKnown RBP14.01□□□□□ -0.17
SPG7-210ENST00000564409 C18orf21Q32NC0 220 aaPredicted RBP14.01□□□□□ -0.17
SPG7-210ENST00000564409 XKR6Q5GH73 641 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 ABHD17CQ6PCB6 329 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 LRRC70Q7Z2Q7 622 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.01□□□□□ -0.17
SPG7-210ENST00000564409 SIAH3Q8IW03 269 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 GPALPP1Q8IXQ4 340 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 SNX31Q8N9S9 440 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 KCNC2Q96PR1 638 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 TMEM79Q9BSE2 394 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 HES7Q9BYE0 225 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 CAB39LQ9H9S4 337 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 NMRAL1Q9HBL8 299 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 LYRM4Q9HD34 91 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 GRHL1Q9NZI5 618 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 ADGRE2Q9UHX3 823 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 ZNF490Q9ULM2 529 aaPredicted RBP14.01□□□□□ -0.17
SPG7-210ENST00000564409 RNF112Q9ULX5 631 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 PYCARDQ9ULZ3 195 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 DAPP1Q9UN19 280 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 NPIPA1Q9UND3 350 aa14.01□□□□□ -0.17
SPG7-210ENST00000564409 YARS2Q9Y2Z4 477 aaKnown RBP14.01□□□□□ -0.17
SPG7-210ENST00000564409 FANCGO15287 622 aa14□□□□□ -0.17
SPG7-210ENST00000564409 CTNSO60931 367 aa14□□□□□ -0.17
SPG7-210ENST00000564409 ZFAND5O76080 213 aa14□□□□□ -0.17
SPG7-210ENST00000564409 PLA2G16P53816 162 aa14□□□□□ -0.17
SPG7-210ENST00000564409 IRF8Q02556 426 aa14□□□□□ -0.17
SPG7-210ENST00000564409 SRSF11Q05519 484 aaKnown RBP14□□□□□ -0.17
SPG7-210ENST00000564409 DOC2AQ14183 400 aa14□□□□□ -0.17
SPG7-210ENST00000564409 OR4D1Q15615 310 aa14□□□□□ -0.17
SPG7-210ENST00000564409 TMEM35AQ53FP2 167 aa14□□□□□ -0.17
SPG7-210ENST00000564409 ZNF468Q5VIY5 522 aaPredicted RBP14□□□□□ -0.17
SPG7-210ENST00000564409 CTAGE3PQ8IX95 158 aa14□□□□□ -0.17
SPG7-210ENST00000564409 TMEM156Q8N614 296 aa14□□□□□ -0.17
SPG7-210ENST00000564409 DAZLQ92904 295 aaKnown RBP14□□□□□ -0.17
SPG7-210ENST00000564409 TBCDQ9BTW9 1192 aa14□□□□□ -0.17
SPG7-210ENST00000564409 CD244Q9BZW8 370 aa14□□□□□ -0.17
SPG7-210ENST00000564409 PNO1Q9NRX1 252 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms