RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 VN1R5Q7Z5H4 357 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 POGLUT1Q8NBL1 392 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 CCT6BQ92526 530 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 SEC16BQ96JE7 1060 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 TEP1Q99973 2627 aaKnown RBP22.27■■□□□ 1.16
NME3-206ENST00000564252 TRIM8Q9BZR9 551 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 PITHD1Q9GZP4 211 aaPredicted RBP22.27■■□□□ 1.16
NME3-206ENST00000564252 CAB39LQ9H9S4 337 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 PRTFDC1Q9NRG1 225 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 PNO1Q9NRX1 252 aaKnown RBP22.27■■□□□ 1.16
NME3-206ENST00000564252 GPRC5BQ9NZH0 403 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 KLF13Q9Y2Y9 288 aaPredicted RBP22.27■■□□□ 1.16
NME3-206ENST00000564252 MTO1Q9Y2Z2 717 aaKnown RBP22.27■■□□□ 1.16
NME3-206ENST00000564252 SNX24Q9Y343 169 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 C19orf84I3L1E1 186 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 ADAM10O14672 748 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 PRAMEF4O60810 478 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 CLEC3AO75596 197 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 CLDN14O95500 239 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 PPP2R1BP30154 601 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 GGT5P36269 586 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 GPR143P51810 404 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 HSD17B7P56937 341 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 RAB38P57729 211 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 GNG11P61952 73 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 PRAMEF9Q5VWM5 478 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 CAPN12Q6ZSI9 719 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 SULF2Q8IWU5 870 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 KRT78Q8N1N4 520 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 SPATA6LQ8N4H0 392 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 PHF10Q8WUB8 498 aaKnown RBP22.26■■□□□ 1.15
NME3-206ENST00000564252 NCLNQ969V3 563 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 MTFMTQ96DP5 389 aaKnown RBP22.26■■□□□ 1.15
NME3-206ENST00000564252 VMP1Q96GC9 406 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 DMRTA2Q96SC8 542 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 NAPGQ99747 312 aaPredicted RBP22.26■■□□□ 1.15
NME3-206ENST00000564252 CAPS2Q9BXY5 557 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 GRPEL1Q9HAV7 217 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 FBXW2Q9UKT8 454 aa22.26■■□□□ 1.15
NME3-206ENST00000564252 CXorf49A8MYA2 514 aaPredicted RBP22.25■■□□□ 1.15
NME3-206ENST00000564252 B3GALT2O43825 422 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 ITGA10O75578 1167 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 SLC12A2P55011 1212 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 ILF2Q12905 390 aaKnown RBP22.25■■□□□ 1.15
NME3-206ENST00000564252 FBXO48Q5FWF7 155 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 ADNP2Q6IQ32 1131 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 ZNF595Q8IYB9 648 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 CYP4Z2PQ8N1L4 340 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 TCAIMQ8N3R3 496 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 FAM47BQ8NA70 645 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 OR2L5Q8NG80 312 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 KRT12Q99456 494 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 REXO4Q9GZR2 422 aaKnown RBP22.25■■□□□ 1.15
NME3-206ENST00000564252 EHD1Q9H4M9 534 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 DNAJC11Q9NVH1 559 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 WWOXQ9NZC7 414 aa22.25■■□□□ 1.15
NME3-206ENST00000564252 A0A088AWK7 358 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 ANKDD1BA6NHY2 528 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 E9PLN8 166 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 KLRC4-KLRK1H3BQV0 150 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 CLDN4O14493 209 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 PRRG2O14669 202 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 TFECO14948 347 aaPredicted RBP22.24■■□□□ 1.15
NME3-206ENST00000564252 PEX1O43933 1283 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 PRKNO60260 465 aaPredicted RBP22.24■■□□□ 1.15
NME3-206ENST00000564252 TFEBP19484 476 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 ZNF10P21506 573 aaPredicted RBP22.24■■□□□ 1.15
NME3-206ENST00000564252 RFC3P40938 356 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 PLA2G16P53816 162 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 SLC13A2Q13183 592 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 C3P1Q6ZMU1 363 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 MDGA2Q7Z553 956 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 TMEM156Q8N614 296 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 C16orf52Q8NHV5 167 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 LURAP1Q96LR2 239 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 VKORC1Q9BQB6 163 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 ADAP2Q9NPF8 381 aa22.24■■□□□ 1.15
NME3-206ENST00000564252 ZNF490Q9ULM2 529 aaPredicted RBP22.24■■□□□ 1.15
NME3-206ENST00000564252 MRPS33Q9Y291 106 aaKnown RBP22.24■■□□□ 1.15
NME3-206ENST00000564252 CYR61O00622 381 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 PHGDHO43175 533 aaKnown RBP22.23■■□□□ 1.15
NME3-206ENST00000564252 CCDC166P0CW27 439 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 CD1DP15813 335 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 CERS1P27544 350 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 SSTR1P30872 391 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 PAFAH1B1P43034 410 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 HSPA7P48741 367 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 LIM2P55344 173 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 OR4D1Q15615 310 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 CDKL4Q5MAI5 379 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 TRIM40Q6P9F5 258 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 ABHD17CQ6PCB6 329 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 GPSM1Q86YR5 675 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 ZNF295-AS1Q8N0V1 137 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 PYROXD1Q8WU10 500 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 ESAMQ96AP7 390 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 WDR34Q96EX3 536 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 SERINC2Q96SA4 455 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 CSF3RQ99062 836 aa22.23■■□□□ 1.15
NME3-206ENST00000564252 CNOT10Q9H9A5 744 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms