RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 MRPS27Q92552 414 aaKnown RBP2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 PHYHIPLQ96FC7 376 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLF1Q9BQI6 1058 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 FAM129AQ9BZQ8 928 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 ST6GALNAC4Q9H4F1 302 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 PDFQ9HBH1 243 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 TMOD3Q9NYL9 352 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 C5AR2Q9P296 337 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 Q9UF83 564 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC6A5Q9Y345 797 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 CPQQ9Y646 472 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 FAM205AQ6ZU69 1335 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF732B4DXR9 585 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 NPIPA3F8WFD2 350 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 UBE2CO00762 179 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 SRPX2O60687 465 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 GGPS1O95749 300 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 PIGRP01833 764 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 DLATP10515 647 aaKnown RBP2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 ERCC2P18074 760 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 PSMA3P25788 255 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 CASP2P42575 452 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 BACE1P56817 501 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 RPS27AP62979 156 aaKnown RBP2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 NAAAQ02083 359 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 RBBP4Q09028 425 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 TNK1Q13470 666 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 FASTKQ14296 549 aaKnown RBP2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 KYNUQ16719 465 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 PCK2Q16822 640 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 VWA2Q5GFL6 755 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 KRBOX4Q5JUW0 171 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 FAM46CQ5VWP2 391 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 NEPROQ6NW34 567 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 ARMCX5Q6P1M9 558 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 RFWD3Q6PCD5 774 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 NUFIP2Q7Z417 695 aaKnown RBP2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 PRR22Q8IZ63 422 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 GTSF1Q8WW33 167 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 SMPDL3AQ92484 453 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 NUS1Q96E22 293 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 AK8Q96MA6 479 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 ANKRD27Q96NW4 1050 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC25A23Q9BV35 468 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 MAF1Q9H063 256 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 IL17CQ9P0M4 197 aa2.32□□□□□ -2.04
HMGB1P33-201ENST00000563485 BCLAF3A2AJT9 711 aaKnown RBP2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 FLRT2O43155 660 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 IGHG3P01860 377 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 MGMTP16455 207 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 ADARP55265 1226 aaKnown RBP2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 PPA1Q15181 289 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 UGCGQ16739 394 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 TTC31Q49AM3 519 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 C2orf83Q53S99 150 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC27A4Q6P1M0 643 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 C17orf107Q6ZR85 190 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 ABI3BPQ7Z7G0 1075 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 VASH2Q86V25 355 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC43A2Q8N370 569 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNRF1Q8ND25 227 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 RAD54LQ92698 747 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 RMDN1Q96DB5 314 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 PPP1R16AQ96I34 528 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 HSD17B14Q9BPX1 270 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 NAA11Q9BSU3 229 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 POLR3GLQ9BT43 218 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 UBQLN3Q9H347 655 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 RSPH14Q9UHP6 348 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 SH3GLB1Q9Y371 365 aa2.31□□□□□ -2.04
HMGB1P33-201ENST00000563485 KLF18A0A0U1RQI7 1052 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 FOXI3A8MTJ6 420 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 HDAC3O15379 428 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 FRAT2O75474 233 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 MOCS2O96007 188 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 DNTTP04053 509 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 SP9P0CG40 484 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 LBPP18428 481 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 FASP25445 335 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 PSMB4P28070 264 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC1A3P43003 542 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC1A6P48664 564 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 CALD1Q05682 793 aaKnown RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 CAMK2DQ13557 499 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 COG2Q14746 738 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 HYAL4Q2M3T9 481 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 RFTN2Q52LD8 501 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF770Q6IQ21 691 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 KLHL10Q6JEL2 608 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 C11orf57Q6ZUT1 292 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 TBC1D10CQ8IV04 446 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 CARNMT1Q8N4J0 409 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 OR6F1Q8NGZ6 308 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 NCOA7Q8NI08 942 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 PCNPQ8WW12 178 aaKnown RBP2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 ESAMQ96AP7 390 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 TSSK2Q96PF2 358 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 MCCC1Q96RQ3 725 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms