RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 PRTFDC1Q9NRG1 225 aa15.79■□□□□ 0.12
CLK3-210ENST00000563112 IGSF5Q9NSI5 407 aa15.79■□□□□ 0.12
CLK3-210ENST00000563112 ANGPTL3Q9Y5C1 460 aa15.79■□□□□ 0.12
CLK3-210ENST00000563112 PCDHGB6Q9Y5F9 930 aa15.79■□□□□ 0.12
CLK3-210ENST00000563112 IGKV3D-11A0A0A0MRZ8 115 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 SYNDIG1LA6NDD5 238 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 WIPF3A6NGB9 483 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 GABRR3A8MPY1 467 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 K7EPI3 171 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 UBXN8O00124 270 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 PRAMEF4O60810 478 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 LDLRP01130 860 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 TUBB4AP04350 444 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 C2P06681 752 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 EPB42P16452 691 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 GMPRP36959 345 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 CD96P40200 585 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 MSH2P43246 934 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 SLC13A2Q13183 592 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 BMPR2Q13873 1038 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 OR1C1Q15619 314 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 C4orf17Q53FE4 359 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 PRAMEF9Q5VWM5 478 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 KLC3Q6P597 504 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 ABHD17CQ6PCB6 329 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 VN1R5Q7Z5H4 357 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 ZNF595Q8IYB9 648 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 TMEM178AQ8NBL3 297 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 RHEBL1Q8TAI7 183 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 UBTD2Q8WUN7 234 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 QRFPRQ96P65 431 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 F2RL3Q96RI0 385 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 DEFB126Q9BYW3 111 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 ACSS3Q9H6R3 686 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 SNX15Q9NRS6 342 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 NINJ2Q9NZG7 142 aa15.78■□□□□ 0.12
CLK3-210ENST00000563112 DIDO1Q9BTC0 2240 aaKnown RBP15.78■□□□□ 0.12
CLK3-210ENST00000563112 A0A1B0GUH1 482 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 A1L4Q6 167 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 LRRTM2O43300 516 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 MLYCDO95822 493 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 CTAGE8P0CG41 777 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 RNF224P0DH78 156 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 GFAPP14136 432 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 CD22P20273 847 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 TYK2P29597 1187 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 EEF1DP29692 281 aaKnown RBP15.77■□□□□ 0.12
CLK3-210ENST00000563112 SERPINB1P30740 379 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 SERPINB8P50452 374 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 ACAP2Q15057 778 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 MED27Q6P2C8 311 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 GFRALQ6UXV0 394 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 CHSY3Q70JA7 882 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 RELL1Q8IUW5 271 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 CTAGE4Q8IX94 777 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 KIF2BQ8N4N8 673 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 FAM98AQ8NCA5 519 aaKnown RBP15.77■□□□□ 0.12
CLK3-210ENST00000563112 IFT81Q8WYA0 676 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 KCNC2Q96PR1 638 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 NPAS2Q99743 824 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 TBCDQ9BTW9 1192 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 KLHL1Q9NR64 748 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 PNO1Q9NRX1 252 aaKnown RBP15.77■□□□□ 0.12
CLK3-210ENST00000563112 ANKRD10Q9NXR5 420 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 ASB1Q9Y576 335 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 IKBKGQ9Y6K9 419 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 SPACA6W5XKT8 324 aa15.77■□□□□ 0.12
CLK3-210ENST00000563112 UNC79Q9P2D8 2635 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 A0A096LPK6 155 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
CLK3-210ENST00000563112 FCHO1O14526 889 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 KLHL2O95198 593 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 TBX6O95947 436 aaPredicted RBP15.76■□□□□ 0.11
CLK3-210ENST00000563112 INHBAP08476 426 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 PCNAP12004 261 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 EPORP19235 508 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 CERS1P27544 350 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 CLCN2P51788 898 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 TDGF1P3P51864 188 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 IRF9Q00978 393 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 E2F2Q14209 437 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 TERF2Q15554 542 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 AP5B1Q2VPB7 878 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 TMEM35AQ53FP2 167 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 GLE1Q53GS7 698 aaKnown RBP15.76■□□□□ 0.11
CLK3-210ENST00000563112 SPINK14Q6IE38 97 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 ADNP2Q6IQ32 1131 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 TAOK1Q7L7X3 1001 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 SCUBE1Q8IWY4 988 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 CENPLQ8N0S6 344 aaPredicted RBP15.76■□□□□ 0.11
CLK3-210ENST00000563112 TEX9Q8N6V9 391 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 FAM47BQ8NA70 645 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 MDS2Q8NDY4 140 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 NFAM1Q8NET5 270 aaPredicted RBP15.76■□□□□ 0.11
CLK3-210ENST00000563112 ZNF473Q8WTR7 871 aaKnown RBP15.76■□□□□ 0.11
CLK3-210ENST00000563112 SIGLEC12Q96PQ1 595 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 PRDM7Q9NQW5 492 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 LRFN1Q9P244 771 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 SEC14L3Q9UDX4 400 aa15.76■□□□□ 0.11
CLK3-210ENST00000563112 ADGRE2Q9UHX3 823 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms