RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 CYP4X1Q8N118 509 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 MARVELD2Q8N4S9 558 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 TMEM52Q8NDY8 209 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 FAM57AQ8TBR7 257 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 ANKRD49Q8WVL7 239 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 TMEM125Q96AQ2 219 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 WDR34Q96EX3 536 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 VMP1Q96GC9 406 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 DERL2Q9GZP9 239 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
HERC2-202ENST00000562136 GPRC5BQ9NZH0 403 aa11.68□□□□□ -0.54
HERC2-202ENST00000562136 FAM95CA0A1B0GW59 222 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 NPEPPSL1A6NEC2 478 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 ZNHIT1O43257 154 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 PEX1O43933 1283 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 PRAMEF4O60810 478 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 ITGA10O75578 1167 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 HNF4AP41235 474 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 HNRNPFP52597 415 aaKnown RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 ARL4CP56559 192 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 RAB38P57729 211 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 TFF3Q07654 80 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 RBBP5Q15291 538 aaKnown RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 TSNQ15631 228 aaKnown RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 PRAMEF9Q5VWM5 478 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 NCCRP1Q6ZVX7 275 aaPredicted RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 MDGA2Q7Z553 956 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 CREG2Q8IUH2 290 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 GPALPP1Q8IXQ4 340 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 ZNF595Q8IYB9 648 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 CFAP36Q96G28 342 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 RUNDC3BQ96NL0 473 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 CAPS2Q9BXY5 557 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 RHBGQ9H310 441 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 RHOJQ9H4E5 214 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 ADAP2Q9NPF8 381 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 ZNF490Q9ULM2 529 aaPredicted RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 YARS2Q9Y2Z4 477 aaKnown RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 ITPR3Q14573 2671 aa11.67□□□□□ -0.54
HERC2-202ENST00000562136 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
HERC2-202ENST00000562136 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 A0A1B0GTH9 108 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 CLDN4O14493 209 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 TAPBPO15533 448 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 ZSCAN12O43309 604 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 PRKNO60260 465 aaPredicted RBP11.66□□□□□ -0.54
HERC2-202ENST00000562136 CTNSO60931 367 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 H2AFYO75367 372 aaKnown RBP11.66□□□□□ -0.54
HERC2-202ENST00000562136 MYO1DO94832 1006 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 SNRPB2P08579 225 aaKnown RBP11.66□□□□□ -0.54
HERC2-202ENST00000562136 PTGS2P35354 604 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 GDF5P43026 501 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 BTN3A2P78410 334 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 PCDH1Q08174 1060 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 ZNF460Q14592 562 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 TGFBIQ15582 683 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 ELAVL1Q15717 326 aaKnown RBP11.66□□□□□ -0.54
HERC2-202ENST00000562136 C18orf21Q32NC0 220 aaPredicted RBP11.66□□□□□ -0.54
HERC2-202ENST00000562136 EMC4Q5J8M3 183 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 HP1BP3Q5SSJ5 553 aaPredicted RBP11.66□□□□□ -0.54
HERC2-202ENST00000562136 ABHD17CQ6PCB6 329 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 CYS1Q717R9 158 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 CYP4Z2PQ8N1L4 340 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 OR2L5Q8NG80 312 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 NCLNQ969V3 563 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 TMEM79Q9BSE2 394 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 ZDHHC11Q9H8X9 412 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 MCCC2Q9HCC0 563 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 PRDM7Q9NQW5 492 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 PRTFDC1Q9NRG1 225 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 DEPPQ9NTK1 212 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 NSMCE4AQ9NXX6 385 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 CTNNAL1Q9UBT7 734 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 VTI1BQ9UEU0 232 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 DAPP1Q9UN19 280 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 ARHGAP21Q5T5U3 1957 aa11.66□□□□□ -0.54
HERC2-202ENST00000562136 ZNF469Q96JG9 3925 aaPredicted RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 A0A088AWK7 358 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 A8MUA0 341 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 TFECO14948 347 aaPredicted RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 ERI3O43414 337 aaKnown RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 HS6ST1O60243 411 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 ZFAND5O76080 213 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 GLSO94925 669 aaPredicted RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 WDR47O94967 919 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 SCELO95171 688 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 TUBB4AP04350 444 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 ZNF10P21506 573 aaPredicted RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 PPP2R1BP30154 601 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 HPDP32754 393 aaPredicted RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 CASP2P42575 452 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 LIM2P55344 173 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 DR1Q01658 176 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 POU4F1Q01851 419 aa11.65□□□□□ -0.54
HERC2-202ENST00000562136 SLBPQ14493 270 aaKnown RBP eCLIP11.65□□□□□ -0.54
HERC2-202ENST00000562136 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
HERC2-202ENST00000562136 TBCCQ15814 346 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms