RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SEC14L3Q9UDX4 400 aa9.63□□□□□ -0.87
CLK3-205ENST00000561673 CPAMD8Q8IZJ3 1885 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 A0A088AWK7 358 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 A0A1B0GUH1 482 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 TGFBR3LH3BV60 316 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 CYR61O00622 381 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 B3GALT2O43825 422 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 ZG16O60844 167 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 MYO1DO94832 1006 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 S100BP04271 92 aaPredicted RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 SP1P08047 785 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 CD46P15529 392 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 TFEBP19484 476 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 ZNF10P21506 573 aaPredicted RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 TPP2P29144 1249 aaPredicted RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 DCTP40126 519 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 CASP2P42575 452 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 HNRNPFP52597 415 aaKnown RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 LIM2P55344 173 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 PER3P56645 1201 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 MLF1P58340 268 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 OC90Q02509 493 aaPredicted RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 IRF8Q02556 426 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 CHIT1Q13231 466 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 NAB1Q13506 487 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 SLMAPQ14BN4 828 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 ZRSR2Q15696 482 aaKnown RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 TBCCQ15814 346 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 ABHD17CQ6PCB6 329 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 SCUBE1Q8IWY4 988 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 LGI4Q8N135 537 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 HORMAD2Q8N7B1 307 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 APCDD1LQ8NCL9 501 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 OR2L5Q8NG80 312 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 RELTQ969Z4 430 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 NXNL1Q96CM4 212 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 F2RL3Q96RI0 385 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 ATOH8Q96SQ7 321 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 LRRC1Q9BTT6 524 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 NMRAL1Q9HBL8 299 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 PRDM7Q9NQW5 492 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 PNO1Q9NRX1 252 aaKnown RBP9.62□□□□□ -0.87
CLK3-205ENST00000561673 ZDHHC18Q9NUE0 388 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 LRFN1Q9P244 771 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 MMACHCQ9Y4U1 282 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 CLDN16Q9Y5I7 305 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
CLK3-205ENST00000561673 SCN2AQ99250 2005 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 HMX2A2RU54 273 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 ASPDHA6ND91 283 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 SUPT3HB4E1H0 165 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 UBXN8O00124 270 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 CLDN4O14493 209 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 KERAO60938 352 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 SUPT3HO75486 399 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 LTA4HP09960 611 aaKnown RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 CERS1P27544 350 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 EEF1DP29692 281 aaKnown RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 PPP2R1BP30154 601 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 HPDP32754 393 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 CYB561P49447 251 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 MTTPP55157 894 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 HSD17B7P56937 341 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 RAB38P57729 211 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 SLC13A2Q13183 592 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 LAPTM5Q13571 262 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 E2F2Q14209 437 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 MAPKAPK3Q16644 382 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 HIST2H2ACQ16777 129 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 PAGE2BQ5JRK9 111 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 MROH9Q5TGP6 573 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 HIST2H2AA3Q6FI13 130 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 SLC25A25Q6KCM7 469 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 TRIM40Q6P9F5 258 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 LRRC70Q7Z2Q7 622 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 GALNTL5Q7Z4T8 443 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 UBE3DQ7Z6J8 389 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 TBC1D1Q86TI0 1168 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 ZNF227Q86WZ6 799 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 CENPLQ8N0S6 344 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 ARMC10Q8N2F6 343 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 FAM47BQ8NA70 645 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 B3GNT7Q8NFL0 401 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 THAP3Q8WTV1 239 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 MRRFQ96E11 262 aaKnown RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 SERINC2Q96SA4 455 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 CSF3RQ99062 836 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 EFCAB11Q9BUY7 163 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 DEFB126Q9BYW3 111 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 TRIM45Q9H8W5 580 aaPredicted RBP9.61□□□□□ -0.87
CLK3-205ENST00000561673 PRTFDC1Q9NRG1 225 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 NUDT4Q9NZJ9 180 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 KCMF1Q9P0J7 381 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 DAPP1Q9UN19 280 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 ACOT9Q9Y305 439 aa9.61□□□□□ -0.87
CLK3-205ENST00000561673 LRBAP50851 2863 aa9.6□□□□□ -0.87
CLK3-205ENST00000561673 CSMD1Q96PZ7 3565 aa9.6□□□□□ -0.87
CLK3-205ENST00000561673 TRGV8A0A0C4DH27 118 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms