RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	TBC1D25	Q3MII6	688 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SPATS1	Q496A3	300 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	KHDRBS2	Q5VWX1	349 aa	Known RBP	7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	ZNF425	Q6IV72	752 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	DLEU7	Q6UYE1	221 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	ADCK2	Q7Z695	626 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	ARPIN	Q7Z6K5	226 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SLC9B2	Q86UD5	537 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	PAQR7	Q86WK9	346 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SFTPA2	Q8IWL1	248 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	FAM20C	Q8IXL6	584 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	RBM12B	Q8IXT5	1001 aa	Known RBP	7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	NAGS	Q8N159	534 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	ENDOV	Q8N8Q3	282 aa	Known RBP	7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	TTL	Q8NG68	377 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	ZDHHC1	Q8WTX9	485 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	STARD8	Q92502	1023 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	JADE3	Q92613	823 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	GTF2H4	Q92759	462 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	STMN2	Q93045	179 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	TMEM125	Q96AQ2	219 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SLC22A18	Q96BI1	424 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	NAF1	Q96HR8	494 aa	Known RBP	7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	EGLN2	Q96KS0	407 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	DPH7	Q9BTV6	452 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SARG	Q9BW04	601 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	RNPEPL1	Q9HAU8	725 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	CMTM6	Q9NX76	183 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SLAMF8	Q9P0V8	285 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	MCM8	Q9UJA3	840 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SNX7	Q9UNH6	387 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	MAPRE3	Q9UPY8	281 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	MAN2B2	Q9Y2E5	1009 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	PCDHGA1	Q9Y5H4	931 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	PCDHA9	Q9Y5H5	950 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	SNX11	Q9Y5W9	270 aa		7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	COL27A1	Q8IZC6	1860 aa	Predicted RBP	7.17	□□□□□ -1.26
TPM1-231	ENST00000561395	MDC1	Q14676	2089 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ANKRD17	O75179	2603 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	GNG14	A0A1W2PPG7	69 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	OR2A25	A4D2G3	310 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	OR6C74	A6NCV1	312 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PLPP1	O14494	284 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SCAMP2	O15127	329 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	NDUFS4	O43181	175 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	AKAP10	O43572	662 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	LCMT2	O60294	686 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PCDHGA12	O60330	932 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	BCAS2	O75934	225 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	KLHL18	O94889	574 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	KCNH1	O95259	989 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PSMG1	O95456	288 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HSD17B1	P14061	328 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	COX7A2	P14406	83 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	UGT2B7	P16662	529 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HOXB9	P17482	250 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	POLR2C	P19387	275 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HNRNPH1	P31943	449 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	S100A3	P33764	101 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	BSG	P35613	385 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	AHR	P35869	848 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	GRIA3	P42263	894 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	KIR3DL1	P43629	444 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ARRB1	P49407	418 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HNRNPF	P52597	415 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PCBP4	P57723	403 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HNRNPK	P61978	463 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HHEX	Q03014	270 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SRSF11	Q05519	484 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	FLOT2	Q14254	428 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	RCN1	Q15293	331 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ZIC1	Q15915	447 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	MAPKAPK3	Q16644	382 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SLC5A12	Q1EHB4	618 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	HKDC1	Q2TB90	917 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PGS1	Q32NB8	556 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	TMEM35A	Q53FP2	167 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	C6orf10	Q5SRN2	563 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	DEPDC1	Q5TB30	811 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	TMEM26	Q6ZUK4	368 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	IKBIP	Q70UQ0	350 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PAGE2	Q7Z2X7	111 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CAMKMT	Q7Z624	323 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	TRIM73	Q86UV7	250 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	GKN2	Q86XP6	184 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PLD3	Q8IV08	490 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	MSRB3	Q8IXL7	192 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SLC15A3	Q8IY34	581 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SDR16C5	Q8N3Y7	309 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	TBC1D19	Q8N5T2	526 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	RNF148	Q8N7C7	305 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	AVL9	Q8NBF6	648 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	MFSD9	Q8NBP5	474 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ZNF248	Q8NDW4	579 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ZNF548	Q8NEK5	533 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	FAM46D	Q8NEK8	389 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	OR8J2	Q8NGG1	315 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	DNAJB8	Q8NHS0	232 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CDC26	Q8NHZ8	85 aa		7.16	□□□□□ -1.26

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