RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 IQCKQ8N0W5 287 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 ACOT4Q8N9L9 421 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 BANPQ8N9N5 519 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 FAM47BQ8NA70 645 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 UCN3Q969E3 161 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 ATP6V1E2Q96A05 226 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 L3HYPDHQ96EM0 354 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 CMTM7Q96FZ5 175 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 THOC3Q96J01 351 aaKnown RBP13.07□□□□□ -0.32
TPM1-230ENST00000561266 OR1F2PQ96R84 312 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 SMAD5Q99717 465 aaKnown RBP13.07□□□□□ -0.32
TPM1-230ENST00000561266 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 PCDHGA11Q9Y5H2 935 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 CSAG2Q9Y5P2 127 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 IGKV3D-11A0A0A0MRZ8 115 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 B8ZZF3 427 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 COPEO14579 308 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 EEDO75530 441 aaKnown RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 ITGAMP11215 1152 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 CHN1P15882 459 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 TAC1P20366 129 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 ITGA3P26006 1051 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 PPP2R1BP30154 601 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 BSGP35613 385 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 PIK3CBP42338 1070 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 HTR6P50406 440 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 MTTPP55157 894 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 RAB38P57729 211 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 IFFO1Q0D2I5 559 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 AIMP2Q13155 320 aaKnown RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 ABRAXAS2Q15018 415 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 GGTA1PQ4G0N0 100 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 SFT2D3Q587I9 215 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 SGO1Q5FBB7 561 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 SRRM1Q8IYB3 904 aaKnown RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 RBMXL3Q8N7X1 1067 aaKnown RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 CLEC1AQ8NC01 280 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 UBE2E3Q969T4 207 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 FAR2Q96K12 515 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 ZIM3Q96PE6 472 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 KCNA7Q96RP8 456 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 SERINC2Q96SA4 455 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 HBEGFQ99075 208 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 ROPN1BQ9BZX4 212 aaPredicted RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 ROPN1Q9HAT0 212 aaPredicted RBP13.06□□□□□ -0.32
TPM1-230ENST00000561266 GPR83Q9NYM4 423 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 DAPP1Q9UN19 280 aa13.06□□□□□ -0.32
TPM1-230ENST00000561266 NSG1A0A0A6YYJ2 146 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 SUV39H1O43463 412 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 B3GALT2O43825 422 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 TMPRSS11DO60235 418 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 PRKRAO75569 313 aaKnown RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 SCELO95171 688 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 PDYNP01213 254 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 PRR35P0CG20 571 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 MYL2P10916 166 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 SFTPCP11686 197 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 ARL1P40616 181 aaPredicted RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 ST13P50502 369 aaKnown RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 FOXA1P55317 472 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 HNRNPH2P55795 449 aaKnown RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 C19orf57Q0VDD7 668 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 PCLAFQ15004 111 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 NSDHLQ15738 373 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 FRG2Q64ET8 278 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 B3GNTL1Q67FW5 361 aaPredicted RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 OR4C11Q6IEV9 310 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 ATG14Q6ZNE5 492 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 QSOX2Q6ZRP7 698 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 C10orf107Q8IVU9 208 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 SCUBE1Q8IWY4 988 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 RIBC1Q8N443 379 aaPredicted RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 CDYL2Q8N8U2 506 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 PTCHD1Q96NR3 888 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 KCNC2Q96PR1 638 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 FRG2BQ96QU4 278 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 TBCDQ9BTW9 1192 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 NPLQ9BXD5 320 aaPredicted RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 CLK4Q9HAZ1 481 aaKnown RBP13.05□□□□□ -0.32
TPM1-230ENST00000561266 MKS1Q9NXB0 559 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 PLLPQ9Y342 182 aa13.05□□□□□ -0.32
TPM1-230ENST00000561266 FASNP49327 2511 aaKnown RBP13.04□□□□□ -0.32
TPM1-230ENST00000561266 A8MUA0 341 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 FOXE1O00358 373 aaPredicted RBP13.04□□□□□ -0.32
TPM1-230ENST00000561266 MAN1A2O60476 641 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 PRMT3O60678 531 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 OTCP00480 354 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 GBAP04062 536 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 CPA3P15088 417 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 IL10P22301 178 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 HIST1H1TP22492 207 aaPredicted RBP13.04□□□□□ -0.32
TPM1-230ENST00000561266 CCT5P48643 541 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 PGDP52209 483 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms