RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CECR2Q9BXF3 1484 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 CARMIL1Q5VZK9 1371 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PARD3Q8TEW0 1356 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 LOC105371242A0A075B767 164 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TRAV26-1A0A087WT03 109 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TRBV5-7A0A0A0MS05 114 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 SLC22A23A1A5C7 686 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 OR6C74A6NCV1 312 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 WIPF3A6NGB9 483 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ASB14A6NK59 587 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 YJEFN3A6XGL0 299 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 LINC00473A8K010 186 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 A8MXQ7 604 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 AHRRA9YTQ3 701 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 NPIPA2E9PIF3 369 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 H0YIG0 161 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ZNF701M0R085 212 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 ARPC3O15145 178 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ARHGEF9O43307 516 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 KCNAB3O43448 404 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 B4GALT3O60512 393 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 FCMRO60667 390 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ATP6AP2O75787 350 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 KRT36O76013 467 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TM7SF2O76062 418 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 JTBO76095 146 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 FARP2O94887 1054 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 LRATO95237 230 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PAPSS2O95340 614 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 CLDN7O95471 211 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 FGFR1OPO95684 399 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 FTH1P02794 183 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 VTNP04004 478 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 RAF1P04049 648 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 SERPIND1P05546 499 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 LYNP07948 512 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PLEKP08567 350 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 IGFBP1P08833 259 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 PABPC4LP0CB38 370 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 OR8G3PP0DMU2 310 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 MBL2P11226 248 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 ODC1P11926 461 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 GP9P14770 177 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 B4GALT1P15291 398 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 GOT1P17174 413 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 POLR2CP19387 275 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 CYP3A5P20815 502 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 HNF1AP20823 631 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ACO1P21399 889 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 U2AF2P26368 475 aaKnown RBP eCLIP1.91□□□□□ -2.1
RTF1-207ENST00000561076 YWHABP31946 246 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 CA8P35219 290 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 SLC1A4P43007 532 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 MAGEA11P43364 429 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 OR3A1P47881 315 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 AVPR1BP47901 424 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 SLC6A8P48029 635 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 GLIPR1P48060 266 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 RFX3P48380 749 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TNFSF10P50591 281 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PPT1P50897 306 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PLCD1P51178 756 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 YWHAEP62258 255 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 RPS15P62841 145 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 CSNK2BP67870 215 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 CX3CL1P78423 397 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ROR2Q01974 943 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 CNTN2Q02246 1040 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 DSC1Q08554 894 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 RASGEF1BQ0VAM2 473 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 BST1Q10588 318 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TRAP1Q12931 704 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 EXOSC2Q13868 293 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 ZNF268Q14587 947 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 OPCMLQ14982 345 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 HEPACAMQ14CZ8 416 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 SPHARQ15513 63 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 CHRNA6Q15825 494 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 USF2Q15853 346 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 MAPK6Q16659 721 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PARP6Q2NL67 630 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 BEAN1Q3B7T3 259 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ANKRD55Q3KP44 614 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 GPR33Q49SQ1 333 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PDLIM3Q53GG5 364 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 AWAT1Q58HT5 328 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 XKR7Q5GH72 579 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PPP6R3Q5H9R7 873 aaPredicted RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 FAM76BQ5HYJ3 339 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 NDUFAF5Q5TEU4 345 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 LIN9Q5TKA1 542 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 ABHD17BQ5VST6 288 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 LIPKQ5VXJ0 399 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 FCRLBQ6BAA4 426 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TWF2Q6IBS0 349 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 OR4A47Q6IF82 309 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 RNASEKQ6P5S7 137 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 CBLN3Q6UW01 205 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 OLFML1Q6UWY5 402 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 PLXDC2Q6UX71 529 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms