RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ADORA2A-AS1P86434 159 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 CALCOCO2Q13137 446 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 ZNF630Q2M218 657 aaPredicted RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 ADPRMQ3LIE5 342 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 RNFT1Q5M7Z0 435 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 PRAMEF9Q5VWM5 478 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 SULT1C3Q6IMI6 304 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 MCEMP1Q8IX19 187 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 CPSF7Q8N684 471 aaKnown RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 OR2L5Q8NG80 312 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 TMEM125Q96AQ2 219 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 QRFPRQ96P65 431 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 GPR22Q99680 433 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 CPNE1Q99829 537 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 REXO4Q9GZR2 422 aaKnown RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 CHST11Q9NPF2 352 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 DNAJC11Q9NVH1 559 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 WWOXQ9NZC7 414 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 ZNF490Q9ULM2 529 aaPredicted RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 TRBV11-1A0A0K0K1C0 115 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 TCRBV9S1A1TA0A576 114 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 CLGNO14967 610 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 B3GALT2O43825 422 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 STK16O75716 305 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 CD1DP15813 335 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 STMN1P16949 149 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 ZNF24P17028 368 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 AGAP20933 346 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 HPDP32754 393 aaPredicted RBP15.13■□□□□ 0.01
SNX1-213ENST00000561026 HSPA7P48741 367 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 GPR143P51810 404 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 SMSP52788 366 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 RAB38P57729 211 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 ATP6V0D1P61421 351 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 SLC13A2Q13183 592 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 OR4D1Q15615 310 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 FBXO48Q5FWF7 155 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 C3orf62Q6ZUJ4 267 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 MAATS1Q7Z4T9 603 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 VN1R5Q7Z5H4 357 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 GHDCQ8N2G8 530 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 TMEM52Q8NDY8 209 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 ESAMQ96AP7 390 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 WDR34Q96EX3 536 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 PTCD3Q96EY7 689 aaKnown RBP15.13■□□□□ 0.01
SNX1-213ENST00000561026 UBXN10Q96LJ8 280 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 RBBP8Q99708 897 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 DPH5Q9H2P9 285 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 PRTFDC1Q9NRG1 225 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 PNO1Q9NRX1 252 aaKnown RBP15.13■□□□□ 0.01
SNX1-213ENST00000561026 PYCARDQ9ULZ3 195 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 MEMO1Q9Y316 297 aa15.13■□□□□ 0.01
SNX1-213ENST00000561026 FAM159BA6NKW6 160 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 TGFBR3LH3BV60 316 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 PPP2R1BP30154 601 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 GP5P40197 560 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 HNRNPFP52597 415 aaKnown RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 DOC2AQ14183 400 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 NAA30Q147X3 362 aaPredicted RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 ZKSCAN8Q15776 578 aaPredicted RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 PDK4Q16654 411 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 XKR6Q5GH73 641 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 ADNP2Q6IQ32 1131 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 TRIM40Q6P9F5 258 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 ABHD17CQ6PCB6 329 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 CHERPQ8IWX8 916 aaKnown RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 ZNF595Q8IYB9 648 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 SNX31Q8N9S9 440 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 FAM47BQ8NA70 645 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 POGLUT1Q8NBL1 392 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 KIAA1191Q96A73 305 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 VMP1Q96GC9 406 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 SERINC2Q96SA4 455 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 EFCAB11Q9BUY7 163 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 CD274Q9NZQ7 290 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 ZNF223Q9UK11 482 aaPredicted RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 PTBP2Q9UKA9 531 aaKnown RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 FBXW2Q9UKT8 454 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 MRPS33Q9Y291 106 aaKnown RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 KLF13Q9Y2Y9 288 aaPredicted RBP15.12■□□□□ 0.01
SNX1-213ENST00000561026 FBN2P35556 2912 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 PKDREJQ9NTG1 2253 aa15.12■□□□□ 0.01
SNX1-213ENST00000561026 KLRC4-KLRK1H3BQV0 150 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CYR61O00622 381 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 RAD51CO43502 376 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ITGA10O75578 1167 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 C1QAP02745 245 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 GSTA2P09210 222 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ABOP16442 354 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CD22P20273 847 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 KCNC1P48547 511 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 MTTPP55157 894 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 LIM2P55344 173 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 GPX6P59796 221 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 HSF1Q00613 529 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 SULF2Q8IWU5 870 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 TMEM156Q8N614 296 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 PDPRQ8NCN5 879 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 NCLNQ969V3 563 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms