RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CSGALNACT1Q8TDX6 532 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 KLHL6Q8WZ60 621 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 TMEM80Q96HE8 168 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 QRFPRQ96P65 431 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FRG2BQ96QU4 278 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 ATG10Q9H0Y0 220 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 CHST8Q9H2A9 424 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FAM120CQ9NX05 1096 aaKnown RBP15.81■□□□□ 0.12
TPM1-228ENST00000560975 FLRT1Q9NZU1 646 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 SH3BP4Q9P0V3 963 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 FTSJ1Q9UET6 329 aa15.81■□□□□ 0.12
TPM1-228ENST00000560975 KCNE1BA0A087WTH5 132 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 ZAR1LA6NP61 321 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 A8MUA0 341 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 TLR4O00206 839 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 BTN3A3O00478 584 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 OR7A10O76100 309 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 ZNF250P15622 560 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 CCL23P55773 120 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 MAB21L1Q13394 359 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 ATXN7L2Q5T6C5 722 aaPredicted RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 GPRC6AQ5T6X5 926 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 GDPGP1Q6ZNW5 385 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 PDZD3Q86UT5 571 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 DTX3Q8N9I9 347 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 SLC37A3Q8NCC5 494 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 ZSCAN5AQ9BUG6 496 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 GTPBP2Q9BX10 602 aaKnown RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 NMNAT1Q9HAN9 279 aaPredicted RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 NDUFB11Q9NX14 153 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 CIB4A0PJX0 185 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 M0QZ92 97 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 APOL3O95236 402 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 IGHA2P01877 340 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 PDGFAP04085 211 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 ZNF865P0CJ78 1059 aaPredicted RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 PCGF2P35227 344 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 RRAS2P62070 204 aaPredicted RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 HKDC1Q2TB90 917 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 FLYWCH1Q4VC44 716 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 USP30Q70CQ3 517 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 FAM46DQ8NEK8 389 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 PHF21AQ96BD5 680 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 NELL2Q99435 816 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 MAPKAP1Q9BPZ7 522 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 MND1Q9BWT6 205 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 TMEM121BQ9BXQ6 578 aaPredicted RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 RACGAP1Q9H0H5 632 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 PPIL3Q9H2H8 161 aaKnown RBP15.8■□□□□ 0.12
TPM1-228ENST00000560975 CRLS1Q9UJA2 301 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 POLHQ9Y253 713 aa15.8■□□□□ 0.12
TPM1-228ENST00000560975 GABRR3A8MPY1 467 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 KDELR3O43731 214 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 ARSBP15848 533 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 CPTPQ5TA50 214 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 CERS6Q6ZMG9 384 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 SLC51BQ86UW2 128 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 OR4A15Q8NGL6 344 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 C1GALT1C1Q96EU7 318 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 MSLNLQ96KJ4 702 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 EVA1BQ9NVM1 165 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 RBFOX1Q9NWB1 397 aaKnown RBP15.79■□□□□ 0.12
TPM1-228ENST00000560975 B3GNT2Q9NY97 397 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 ACSL6Q9UKU0 697 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 PRAMEF33A0A0G2JMD5 474 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 H3BN98 237 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 PRAMEF10O60809 474 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 RHOCP08134 193 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 ITGB7P26010 798 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 MRPS6P82932 125 aaKnown RBP15.79■□□□□ 0.12
TPM1-228ENST00000560975 IL18Q14116 193 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 ZNF267Q14586 743 aaPredicted RBP15.79■□□□□ 0.12
TPM1-228ENST00000560975 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 KIAA1841Q6NSI8 718 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 CNIH2Q6PI25 160 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 UBE2R2Q712K3 238 aaPredicted RBP15.79■□□□□ 0.12
TPM1-228ENST00000560975 CELF5Q8N6W0 485 aaKnown RBP15.79■□□□□ 0.12
TPM1-228ENST00000560975 GALNT6Q8NCL4 622 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 KATNAL1Q9BW62 490 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 ACAT2Q9BWD1 397 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 SPATA9Q9BWV2 254 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 ANKRA2Q9H9E1 313 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 B3GAT2Q9NPZ5 323 aa15.79■□□□□ 0.12
TPM1-228ENST00000560975 SPIN1Q9Y657 262 aaPredicted RBP15.79■□□□□ 0.12
TPM1-228ENST00000560975 OTOFQ9HC10 1997 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 GAPDHSO14556 408 aaPredicted RBP15.78■□□□□ 0.12
TPM1-228ENST00000560975 LYRM1O43325 122 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 PLOD3O60568 738 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 PRKAR1AP10644 381 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 TNNI3P19429 210 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 ENPP1P22413 925 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 SLC9A3P48764 834 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 ALDH9A1P49189 494 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 INPP1P49441 399 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 SGSHP51688 502 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 CHIT1Q13231 466 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 MZT2BQ6NZ67 158 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 LAS2Q8IYD9 372 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 OR4K1Q8NGD4 311 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms