RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CRIM1Q9NZV1 1036 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 SAMD15Q9P1V8 674 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 MYOTQ9UBF9 498 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 ACAD8Q9UKU7 415 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 TCRBV7S3A2A0A539 114 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 HCN1O60741 890 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 OR2J2O76002 312 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 SERPIND1P05546 499 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 MAGEA6P43360 314 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 HSD17B7P56937 341 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 DHX9Q08211 1270 aaKnown RBP17.2■□□□□ 0.34
TPM1-226ENST00000560959 SLC10A1Q14973 349 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 XKR6Q5GH73 641 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 C1orf185Q5T7R7 199 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 WLSQ5T9L3 541 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 HECTD2Q5U5R9 776 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 CASC4Q6P4E1 433 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 PAMR1Q6UXH9 720 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 IL20RBQ6UXL0 311 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 MBOAT1Q6ZNC8 495 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 GSTA5Q7RTV2 222 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 CA13Q8N1Q1 262 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 TMEM251Q8N6I4 163 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 GOLM1Q8NBJ4 401 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 LRRC46Q96FV0 321 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 C18orf12Q96KH6 178 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 SGCZQ96LD1 299 aa17.2■□□□□ 0.34
TPM1-226ENST00000560959 TRMT6Q9UJA5 497 aaKnown RBP17.2■□□□□ 0.34
TPM1-226ENST00000560959 ZCWPW2A0A1B0GU75 182 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 HAUS5O94927 633 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 OR6B1O95007 311 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 RAF1P04049 648 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 SERPINA6P08185 405 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 MLNP12872 115 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 HOXC12P31275 282 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 MAN2A2P49641 1150 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 AP1S2P56377 157 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 RAB8AP61006 207 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 HYAL2Q12891 473 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 CSHL1Q14406 222 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 DEFB113Q30KQ7 82 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 FLYWCH1Q4VC44 716 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 RTL4Q6ZR62 310 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 WDR53Q7Z5U6 358 aaPredicted RBP17.19■□□□□ 0.34
TPM1-226ENST00000560959 SPNS2Q8IVW8 549 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 OR4K3Q96R72 315 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 RASL10BQ96S79 203 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 NPLQ9BXD5 320 aaPredicted RBP17.19■□□□□ 0.34
TPM1-226ENST00000560959 PNO1Q9NRX1 252 aaKnown RBP17.19■□□□□ 0.34
TPM1-226ENST00000560959 FOXD3Q9UJU5 478 aaPredicted RBP17.19■□□□□ 0.34
TPM1-226ENST00000560959 CLDN16Q9Y5I7 305 aa17.19■□□□□ 0.34
TPM1-226ENST00000560959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.18■□□□□ 0.34
TPM1-226ENST00000560959 SDR42E2A6NKP2 422 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 HSPB2A8KAH6 182 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 CLDN4O14493 209 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 PRKNO60260 465 aaPredicted RBP17.18■□□□□ 0.34
TPM1-226ENST00000560959 SLC1A2P43004 574 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 MAGEA5P43359 124 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 FOXO1Q12778 655 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 HSPB2Q16082 182 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 PHKG1Q16816 387 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 FBXL19-AS1Q494R0 122 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 CATSPEREQ5SY80 951 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
TPM1-226ENST00000560959 MYO1HQ8N1T3 1032 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 OR8K3Q8NH51 312 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 ATL1Q8WXF7 558 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 ZNF669Q96BR6 464 aaPredicted RBP17.18■□□□□ 0.34
TPM1-226ENST00000560959 PYCR2Q96C36 320 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 RHBGQ9H310 441 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 ADAP2Q9NPF8 381 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 TAS2R13Q9NYV9 303 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 FBXO5Q9UKT4 447 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 LIPGQ9Y5X9 500 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 CAPN6Q9Y6Q1 641 aa17.18■□□□□ 0.34
TPM1-226ENST00000560959 FAM171A2A8MVW0 826 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 GOSR1O95249 250 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 ATE1O95260 518 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 SOX3P41225 446 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 TIAL1Q01085 375 aaKnown RBP eCLIP17.17■□□□□ 0.34
TPM1-226ENST00000560959 SKOR2Q2VWA4 1001 aaPredicted RBP17.17■□□□□ 0.34
TPM1-226ENST00000560959 HSDL2Q6YN16 418 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 ANKRD53Q8N9V6 530 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 WFDC11Q8NEX6 87 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 MAIP1Q8WWC4 291 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 SLC5A11Q8WWX8 675 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 NEIL2Q969S2 332 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 FBXL8Q96CD0 374 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 PWWP2AQ96N64 755 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 AIF1LQ9BQI0 150 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 TRIM54Q9BYV2 358 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 KLHL31Q9H511 634 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 LDAHQ9H6V9 325 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 PELI2Q9HAT8 420 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 PRTFDC1Q9NRG1 225 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 SACM1LQ9NTJ5 587 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 ARL15Q9NXU5 204 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 CBLCQ9ULV8 474 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms