RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ITGA2P17301 1181 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PCMT1P22061 227 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 IL10P22301 178 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 GTF2E2P29084 291 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SHMT2P34897 504 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CASRP41180 1078 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PXNP49023 591 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 RAC3P60763 192 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ST8SIA6P61647 398 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 VBP1P61758 197 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 NKX3-2P78367 333 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SEMA3BQ13214 749 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SMTNL2Q2TAL5 461 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 GPAT3Q53EU6 434 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SGO1Q5FBB7 561 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 BRAT1Q6PJG6 821 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF517Q6ZMY9 492 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ERN2Q76MJ5 926 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PIGZQ86VD9 579 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 LDHDQ86WU2 507 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 LILRA3Q8N6C8 439 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PCDH20Q8N6Y1 951 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF417Q8TAU3 575 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 DNAJB14Q8TBM8 379 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 B3GALT6Q96L58 329 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 HS6ST2Q96MM7 605 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF300Q96RE9 604 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF587Q96SQ5 575 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 C19orf43Q9BQ61 176 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 GPR61Q9BZJ8 451 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 KCNH6Q9H252 994 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 EPHX3Q9H6B9 360 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 WDR55Q9H6Y2 383 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 RANGRFQ9HD47 186 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SPAG4Q9NPE6 437 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 AGPAT3Q9NRZ7 376 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CCDC59Q9P031 241 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 FRRS1LQ9P0K9 344 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 DCDC2Q9UHG0 476 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNFX1Q9P2E3 1918 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 TRBV23OR9-2A0A075B6M9 112 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 hCG_1818297A0A087WSY0 165 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 I3L521 148 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 AKAP8O43823 692 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SSX4O60224 188 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 GDF9O60383 454 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 MED24O75448 989 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 IGHEP01854 428 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PRKCGP05129 697 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF250P15622 560 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 FUT1P19526 365 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CORO1AP31146 461 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 RAP1GAPP47736 663 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CAMPP49913 170 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CYP2J2P51589 502 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 MFAP3P55082 362 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SNAP25P60880 206 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ARF5P84085 180 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SP2Q02086 613 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PRKCDQ05655 676 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 UGP2Q16851 508 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM196Q5HYL7 178 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SAMD4BQ5PRF9 694 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SLCO4C1Q6ZQN7 724 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 RNF144BQ7Z419 303 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ADCK2Q7Z695 626 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 TAF8Q7Z7C8 310 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 RAB43Q86YS6 212 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 L3MBTL4Q8NA19 623 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CLEC1AQ8NC01 280 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 MAGEE2Q8TD90 523 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC7A6Q92536 515 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 NCLNQ969V3 563 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 LENG9Q96B70 501 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM149B1Q96BN6 582 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 YIPF6Q96EC8 236 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 MMABQ96EY8 250 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 MSANTD3Q96H12 275 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 FYTTD1Q96QD9 318 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 DPYSL5Q9BPU6 564 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 SH2D3AQ9BRG2 576 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 FRMD8P1Q9BZ68 369 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PITHD1Q9GZP4 211 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 GBA2Q9HCG7 927 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 TBC1D13Q9NVG8 400 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 HAO2Q9NYQ3 351 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 OPTCQ9UBM4 332 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 NUDT5Q9UKK9 219 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ASB1Q9Y576 335 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 COPG1Q9Y678 874 aaKnown RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 STON1Q9Y6Q2 735 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 DHRS12A0PJE2 317 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC33A1O00400 549 aaPredicted RBP6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 FCGR1AP12314 374 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ITGALP20701 1170 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 ATP6V1B2P21281 511 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 HNF1BP35680 557 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 HMGCLP35914 325 aa6.45□□□□□ -1.38
TSPAN3-209ENST00000560715 RPS5P46782 204 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms